Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_0764 |
Symbol | |
ID | 6288983 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | + |
Start bp | 806255 |
End bp | 806644 |
Gene Length | 390 bp |
Protein Length | 129 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642624328 |
Product | fimbrial protein |
Protein accession | YP_001898347 |
Protein GI | 187927860 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.445184 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.0124058 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAAAAAA ATCTATACCG CCTCGAGTCG GATCATCTTC TCCGCGGTTT CTGTATGACC GCGTTTTTCT TGGCGGCTCT GCTCTCCTCG CCAGCTGACG CCGCAAACTG CACAATTCGG CAAGGCGCCG TCGTCAAGCA ACTCGCGTTT CAAATACCTT CAAGCTTTAC CGTACCGCGC GATGCACCCA TCGGTACCGT GATCTATGAA AGCGCACCTA TAACGAACAG TGCACAAGAC ACACTGTCCT TCACCTGTAC TGCCGCCTTC CGCTGGGGTT TGGTGAATTC GGTCGGAGGG ATTCCGCCTG CCGCTACCAA AGTCGATATG CCGATCGGAA ATACCGGACT GGCGTGGGGC CTGGTCTACA AGCGCGAGAG CCTGGAATGA
|
Protein sequence | MQKNLYRLES DHLLRGFCMT AFFLAALLSS PADAANCTIR QGAVVKQLAF QIPSSFTVPR DAPIGTVIYE SAPITNSAQD TLSFTCTAAF RWGLVNSVGG IPPAATKVDM PIGNTGLAWG LVYKRESLE
|
| |