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15 homologs were found in PanDaTox collection
for query gene
Rpic12D_1294
on replicon NC_012856
Organism:
Ralstonia pickettii 12D
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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score
E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_012856
Rpic12D_1294
hypothetical protein
100
87 aa
177
4e-44
Ralstonia pickettii 12D
Bacteria
normal
0.218039
normal
0.118522
-
NC_010682
Rpic_1231
hypothetical protein
90.8
99 aa
166
1e-40
Ralstonia pickettii 12J
Bacteria
normal
1
normal
1
-
NC_003295
RSc3434
hypothetical protein
40.7
86 aa
57.8
0.00000005
Ralstonia solanacearum GMI1000
Bacteria
normal
1
normal
1
-
NC_010678
Rpic_3875
hypothetical protein
39.51
92 aa
57.8
0.00000005
Ralstonia pickettii 12J
Bacteria
normal
1
normal
0.228714
-
NC_012857
Rpic12D_3989
hypothetical protein
39.51
92 aa
57.8
0.00000005
Ralstonia pickettii 12D
Bacteria
normal
1
normal
1
-
NC_010682
Rpic_3635
hypothetical protein
41.46
94 aa
55.1
0.0000003
Ralstonia pickettii 12J
Bacteria
normal
1
normal
1
-
NC_012856
Rpic12D_3310
hypothetical protein
41.46
94 aa
55.1
0.0000003
Ralstonia pickettii 12D
Bacteria
normal
1
normal
1
-
NC_012856
Rpic12D_0009
hypothetical protein
39.02
122 aa
53.5
0.000001
Ralstonia pickettii 12D
Bacteria
normal
1
normal
1
-
NC_010682
Rpic_0007
hypothetical protein
39.02
122 aa
52.4
0.000002
Ralstonia pickettii 12J
Bacteria
normal
0.303674
normal
1
-
NC_010682
Rpic_3449
hypothetical protein
39.02
122 aa
52.8
0.000002
Ralstonia pickettii 12J
Bacteria
normal
1
normal
1
-
NC_012856
Rpic12D_3105
hypothetical protein
39.02
121 aa
52.4
0.000002
Ralstonia pickettii 12D
Bacteria
normal
1
normal
1
-
NC_010682
Rpic_3583
hypothetical protein
38.64
122 aa
49.7
0.00001
Ralstonia pickettii 12J
Bacteria
normal
1
normal
0.881264
-
NC_012856
Rpic12D_3259
hypothetical protein
36.78
122 aa
47.8
0.00005
Ralstonia pickettii 12D
Bacteria
normal
1
normal
1
-
NC_010678
Rpic_4118
hypothetical protein
35.29
90 aa
41.2
0.004
Ralstonia pickettii 12J
Bacteria
normal
0.457314
normal
0.0301059
-
NC_012857
Rpic12D_4230
hypothetical protein
35.29
90 aa
41.2
0.004
Ralstonia pickettii 12D
Bacteria
normal
0.207721
normal
1
-
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