15 homologs were found in PanDaTox collection
for query gene Rpic_3449 on replicon NC_010682
Organism: Ralstonia pickettii 12J



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010682  Rpic_3449  hypothetical protein  100 
 
 
122 aa  253  8e-67  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_010682  Rpic_0007  hypothetical protein  91.8 
 
 
122 aa  235  1e-61  Ralstonia pickettii 12J  Bacteria  normal  0.303674  normal 
 
 
-
 
NC_012856  Rpic12D_0009  hypothetical protein  92.62 
 
 
122 aa  234  4e-61  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_012856  Rpic12D_3105  hypothetical protein  96.84 
 
 
121 aa  196  7e-50  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010682  Rpic_3583  hypothetical protein  96.84 
 
 
122 aa  195  2.0000000000000003e-49  Ralstonia pickettii 12J  Bacteria  normal  normal  0.881264 
 
 
-
 
NC_012856  Rpic12D_3259  hypothetical protein  91.58 
 
 
122 aa  186  1e-46  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010682  Rpic_3635  hypothetical protein  71.26 
 
 
94 aa  138  1.9999999999999998e-32  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_012856  Rpic12D_3310  hypothetical protein  70 
 
 
94 aa  139  1.9999999999999998e-32  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010678  Rpic_4118  hypothetical protein  48.84 
 
 
90 aa  93.6  8e-19  Ralstonia pickettii 12J  Bacteria  normal  0.457314  normal  0.0301059 
 
 
-
 
NC_012857  Rpic12D_4230  hypothetical protein  48.84 
 
 
90 aa  93.6  8e-19  Ralstonia pickettii 12D  Bacteria  normal  0.207721  normal 
 
 
-
 
NC_003295  RSc3434  hypothetical protein  47.06 
 
 
86 aa  85.1  3e-16  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_010682  Rpic_1231  hypothetical protein  37.5 
 
 
99 aa  55.5  0.0000003  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_010678  Rpic_3875  hypothetical protein  39.29 
 
 
92 aa  53.9  0.0000007  Ralstonia pickettii 12J  Bacteria  normal  normal  0.228714 
 
 
-
 
NC_012857  Rpic12D_3989  hypothetical protein  39.29 
 
 
92 aa  53.9  0.0000007  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_012856  Rpic12D_1294  hypothetical protein  39.02 
 
 
87 aa  52.8  0.000001  Ralstonia pickettii 12D  Bacteria  normal  0.218039  normal  0.118522 
 
 
-
 
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