15 homologs were found in PanDaTox collection
for query gene Rpic_1231 on replicon NC_010682
Organism: Ralstonia pickettii 12J



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010682  Rpic_1231  hypothetical protein  100 
 
 
99 aa  201  3e-51  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_012856  Rpic12D_1294  hypothetical protein  90.8 
 
 
87 aa  166  1e-40  Ralstonia pickettii 12D  Bacteria  normal  0.218039  normal  0.118522 
 
 
-
 
NC_012856  Rpic12D_3310  hypothetical protein  41.38 
 
 
94 aa  58.9  0.00000002  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010682  Rpic_3635  hypothetical protein  41.38 
 
 
94 aa  58.5  0.00000003  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_010678  Rpic_3875  hypothetical protein  39.51 
 
 
92 aa  58.2  0.00000004  Ralstonia pickettii 12J  Bacteria  normal  normal  0.228714 
 
 
-
 
NC_012857  Rpic12D_3989  hypothetical protein  39.51 
 
 
92 aa  58.2  0.00000004  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_003295  RSc3434  hypothetical protein  39.53 
 
 
86 aa  57.4  0.00000006  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_010682  Rpic_0007  hypothetical protein  37.93 
 
 
122 aa  54.7  0.0000005  Ralstonia pickettii 12J  Bacteria  normal  0.303674  normal 
 
 
-
 
NC_012856  Rpic12D_0009  hypothetical protein  37.21 
 
 
122 aa  53.9  0.0000007  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010682  Rpic_3449  hypothetical protein  37.21 
 
 
122 aa  53.1  0.000001  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_012856  Rpic12D_3105  hypothetical protein  37.21 
 
 
121 aa  52.8  0.000002  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010682  Rpic_3583  hypothetical protein  38.04 
 
 
122 aa  51.2  0.000004  Ralstonia pickettii 12J  Bacteria  normal  normal  0.881264 
 
 
-
 
NC_012856  Rpic12D_3259  hypothetical protein  35.87 
 
 
122 aa  48.5  0.00003  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010678  Rpic_4118  hypothetical protein  37.78 
 
 
90 aa  47.8  0.00005  Ralstonia pickettii 12J  Bacteria  normal  0.457314  normal  0.0301059 
 
 
-
 
NC_012857  Rpic12D_4230  hypothetical protein  37.78 
 
 
90 aa  47.8  0.00005  Ralstonia pickettii 12D  Bacteria  normal  0.207721  normal 
 
 
-
 
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