13 homologs were found in PanDaTox collection
for query gene RoseRS_3830 on replicon NC_009523
Organism: Roseiflexus sp. RS-1



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009523  RoseRS_3830  hypothetical protein  100 
 
 		 246 aa  479  1e-134  Roseiflexus sp. RS-1  Bacteria  normal  0.346144  hitchhiker  0.000852745 
 
 
-
 
NC_009767  Rcas_0972  hypothetical protein  80.08 
 
 		 246 aa  377  1e-103  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  normal  0.484216 
 
 
-
 
NC_009565  TBFG_12701  antibiotic ABC transporter integral membrane protein  35.83 
 
 		 252 aa  133  1.9999999999999998e-30  Mycobacterium tuberculosis F11  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008146  Mmcs_2204  putative antibiotic-transport integral membrane leucine and alanine and valine rich protein ABC transporter  36.67 
 
 		 248 aa  127  2.0000000000000002e-28  Mycobacterium sp. MCS  Bacteria  normal  0.314422  n/a   
 
 
-
 
NC_008705  Mkms_2250  putative antibiotic-transport integral membrane leucine  36.67 
 
 		 248 aa  127  2.0000000000000002e-28  Mycobacterium sp. KMS  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009077  Mjls_2193  putative antibiotic-transport integral membrane leucine and alanine and valine rich protein ABC transporter  36.67 
 
 		 248 aa  127  2.0000000000000002e-28  Mycobacterium sp. JLS  Bacteria  normal  0.559128  normal  0.0492982 
 
 
-
 
NC_013947  Snas_4681  hypothetical protein  35.22 
 
 		 241 aa  124  1e-27  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.595604  normal  0.0608845 
 
 
-
 
NC_008726  Mvan_0774  putative antibiotic-transport integral membrane leucine and alanine and valine rich protein ABC transporter  35.74 
 
 		 251 aa  122  4e-27  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  1  normal  0.215016 
 
 
-
 
NC_011830  Dhaf_2003  hypothetical protein  30.51 
 
 		 235 aa  97.1  2e-19  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.168477  n/a   
 
 
-
 
NC_014210  Ndas_1679  hypothetical protein  34.34 
 
 		 522 aa  66.6  0.0000000004  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  1  normal  0.789815 
 
 
-
 
NC_009455  DehaBAV1_0255  ABC-2 type transporter  32.68 
 
 		 357 aa  53.5  0.000003  Dehalococcoides sp. BAV1  Bacteria  normal  1  n/a   
 
 
-
 
NC_002936  DET0114  ABC transporter, substrate-binding protein, putative  30.67 
 
 		 357 aa  52.8  0.000005  Dehalococcoides ethenogenes 195  Bacteria  normal  1  n/a   
 
 
-
 
NC_013552  DhcVS_123  ABC transporter, type 2, substrate-binding protein  26.53 
 
 		 357 aa  46.6  0.0004  Dehalococcoides sp. VS  Bacteria  normal  1  n/a   
 
 
-
 
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