Gene DET0114 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDET0114 
Symbol 
ID3230535 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides ethenogenes 195 
KingdomBacteria 
Replicon accessionNC_002936 
Strand- 
Start bp112188 
End bp113261 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content51% 
IMG OID637119683 
ProductABC transporter, substrate-binding protein, putative 
Protein accessionYP_180865 
Protein GI57235064 
COG category[C] Energy production and conversion
[P] Inorganic ion transport and metabolism 
COG ID[COG1668] ABC-type Na+ efflux pump, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCATAA AGCACATCAT CACCCTTTTT AACCGCGAAG TAATCCACGG CCCTAAGGAC 
GTTACCTTTA TAATGGTAGT GGTAACCCCC ATACTTATTT CCCTGTTTAT ATCTCTGGCT 
TTCGGCAATA TTTTTTCGGA AAAACCCAAG CTGGGGCTGA CTGATTTGGG CAGCTCCCAG 
CTTGTAAGCC TGCTGAAAGA AAACAGCACC CTGCTTATTA AGGAATATCC TGACGAAGCC 
ACCCTTAAAG AGGCGGCTAC AAGCGGTGCG GTAGACATGG GGCTGGTACT GCCGGCAGAT 
TTTGATACCG CCCTTATCCA GACCAATACC CTCAAGGCTA GTGCCTATGT CTGGGGGGAA 
AGCCTGGCTA AAAACCGCAT GATTATCCCG GCGGTGCTGG CTGATACCGC CAGACAGATT 
ACCGGGGCGG AAGTGCCGGT GGAGATAAAC TCCATCTCAC TGGGAGATGA GCAGAACGTA 
CCCTGGTCTG ACCGTTTGTT TCCCTTCGTG GTACTCATGG CCATGTTCTT CAGCGGGCTG 
ATGCTGCCGG CCAGTTCCCT TATAGATGAA AAACAAAAAC GCACTCTGGA AGCAGTCAAT 
ATCACCCCGG CCACTCTGGG CGAAATATTT ACCGCCAAGG GGGCCATAGG CACTCTGCTG 
GGCTTAATTA TGGGGCTTAT TATACTCGGT ATGAACTCAG CTTTCGGCAA TGCCCCTCTG 
CCGCTGGTAC TGATGCTAAT ACTGGGTTCG CTCATGGCCT CTTTGCTGGG GCTTCTGGCA 
GGTGCCTTTA TAAAGGATAT GAACACCCTT TTTGCCGTCT GGAAGTTCGG CGGGCTGCTC 
CTTTTCGGAC CGGCTTTCAT TTACCTTTTC CCCCAGATAC CCCAGTGGAT AGGTTACTTC 
TTCCCCACCT ATTACATCTT AAAACCGGTA GTAGACCTGA GTATTTATGA TGCCGGCTGG 
TCTGACATAG CCCTGAACGC AGGTATAACC GTGATACTGG TGGCTATACT GCTGGCAGTG 
GTTTCCAACG TAGTCAAACG CATGTCAAAC TCTGCCCTGC GCCTTTATAC CTGA
 
Protein sequence
MSIKHIITLF NREVIHGPKD VTFIMVVVTP ILISLFISLA FGNIFSEKPK LGLTDLGSSQ 
LVSLLKENST LLIKEYPDEA TLKEAATSGA VDMGLVLPAD FDTALIQTNT LKASAYVWGE 
SLAKNRMIIP AVLADTARQI TGAEVPVEIN SISLGDEQNV PWSDRLFPFV VLMAMFFSGL 
MLPASSLIDE KQKRTLEAVN ITPATLGEIF TAKGAIGTLL GLIMGLIILG MNSAFGNAPL 
PLVLMLILGS LMASLLGLLA GAFIKDMNTL FAVWKFGGLL LFGPAFIYLF PQIPQWIGYF 
FPTYYILKPV VDLSIYDAGW SDIALNAGIT VILVAILLAV VSNVVKRMSN SALRLYT