8 homologs were found in PanDaTox collection
for query gene RSP_1783 on replicon NC_007493
Organism: Rhodobacter sphaeroides 2.4.1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007493  RSP_1783  hypothetical protein  100 
 
 
364 aa  714    Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009049  Rsph17029_0430  membrane protein  98.63 
 
 
364 aa  706    Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.0785433  normal 
 
 
-
 
NC_009430  Rsph17025_3993  hypothetical protein  43.35 
 
 
356 aa  218  2e-55  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.0182739  normal  0.26526 
 
 
-
 
NC_011365  Gdia_1134  hypothetical protein  28.5 
 
 
376 aa  56.6  0.0000006  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_4120  hypothetical protein  28.57 
 
 
679 aa  45.8  0.001  Pseudomonas aeruginosa PA7  Bacteria  normal  0.215585  n/a   
 
 
-
 
NC_007925  RPC_0368  hypothetical protein  29.28 
 
 
378 aa  45.1  0.002  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.992488 
 
 
-
 
NC_008463  PA14_47810  hypothetical protein  26.79 
 
 
679 aa  44.3  0.004  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  hitchhiker  0.00112495  normal 
 
 
-
 
NC_010681  Bphyt_1114  protein of unknown function DUF893 YccS/YhfK  32 
 
 
699 aa  43.1  0.008  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
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