Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_1114 |
Symbol | |
ID | 6281061 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 1254765 |
End bp | 1256864 |
Gene Length | 2100 bp |
Protein Length | 699 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642620673 |
Product | protein of unknown function DUF893 YccS/YhfK |
Protein accession | YP_001894754 |
Protein GI | 187923112 |
COG category | [S] Function unknown |
COG ID | [COG1289] Predicted membrane protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTGAATC GCAAGTCCAA CCCGTCGTCT TCATCGCAAC GCTGGTCGAA CTGGCTGTAT GCCGTCGTCA GCGCGATCTA CCGCAAGCGG CCGGTATGGA TGGTGTCGTT TTCGACCAGC GAGGCCAGCC TCTCCGAAGG CTTGCGAGCG GCTTGTGCGT CGACGGCCAT GCTCGCGCTC GGCAATCTGC TGCACGAACC GACATTTGCG TGGGCGGCGA TCGGCGCGTT CTGGACCTGC CTCGCCGATG CGGGCGGCTC CAACCGCGCG CGCTTTGCCT CGATGATGGG CTTCGCGGTG CTGTCCACAC TGTGCGGCGG CCTGACCGCT TACGCTTCCG GAGCGGGCGC CGTGTTCGCG GCGCTCGCGG TGCTGGTGTT CACGACAATC GGCGCATTCG GCAGGATCTG GGGCGCGGCC ACATCGCAGG TAACGATTCT CGCGGCCACC GCATGCGTCG TGATGGTCGA CCGGCCGATG CACAGCGTTC GGCAAGGCAT GGCGTTTCTC GGCATCTACC TGGTGGGGTG TCTGTTTGCC GTGGCGCTGA GTTTGACGGT CTGGCGCATT CATCCTTTCG GCACGAGCCG CTCGTCGTTG CGCGCCGTGT ATCTGCGTCT TGCCGATATC GCCGTGGACA GCGCGCGGCT GCTCGAACGC CGCGCGGCGC GCGGCGAATG GGCCACGCAT GCCGCAAAAT TTCGCGCCGA CGCCCGCGCC GCGCTGGAGC GCTCGCGCAA AGTGCTCGCG CGTGTGCCGG CATCGAGAAC GGGTGGCCGC GAAACCTACG ACACGCTGCT CGGCCTGCTG ACCGACAGCG AAGCGTTGTT CGCGTATCTG ATCGCCGTCT CGGGCGCCTG TGAACGAGTC CCCGACGACG CATGGCGCGC GCAACGCGCG GCGCGGCTGC TGACGGTCAT GGGCGACGTA CTGCGCGGCA TCGGCGCGGC CGCCAACGAC GCACAGTGGG CGCGTCTCGC CGATTTGCAG CTGCGTTTGC GGCGTTTTGC TCGGCGCCTC GAAACTGCCT TGATGGAGCC CGTGACACTG AAGTCCGATT TCGAACTGGT CGACTTCACG CCGGTGCACG CAGAGCCCGA AGGCTGGCGC GACAACGCCG CGCGGCTTTT CACTCGCGTC TGGTCCACCT TCAAGGCCAA CCTGTCGGTC GAGTCCGTCG GCTTGCGGCA CGCGGCGCGC GTCGGCGTGA CGACCACCAC GGGCTTTCTC GTGATCCGCG CGCTCGGCCT GCCGTTCGGC TACTGGGCCA CAATGGCGAC GCTGCTGATT TTGCAACCGT CGATCGCCGC GACCTGGCCG CGCAGTATCG AGCGTGCGGC CGGCAGCATC GTAGGCGGCG TGCTGGCGGC GGCGATCGGC TATGCGATCC ATTCGCCGCT CGGCATTTCG CTCGCGGTAT TTCCGCTGGT GATGGCGACC ATGGCGCTGC GGCCAGTGAG CTACAGCCTC TTCGTGTTGT TCCTCACGCC GACCTTCGTG CTGGTCGCCG ACTTCGCGAC GCCGGGCGCC AGCGAATTCG CCTATGCGCT CACGCGGCTC GGCAACAACG TGCTCGGTTG CGTATTGGCG CTGCTGGCCA CGTTCTATCT CTGGCCGACG CGCGAAAAGA TCGACTATCG CGCGTACTTG AGCGAGGCGG TGCGCGCCAA TCTGGCTTAT CTGAAAGCCG CGATGGAATC GCCTCGCCGC AGCGAGAAAG AGATGGAGCG CTTGCGCCGC GCCGCGGGTC TGGGCAGCAA TAACGCAGAG GAAGCCATCG GCCGGATGCG CCTCGAAAAA CTCGAGGACT CGATGGTCGA CACCGTCACG CTCACCGTGC TGAGCCTGTT GCGAAGAATG GCCGGCACCG CGACGCAACT GCGCCTGAGT ATGAACCGGC GCGACATGCA CGACGAACTC GGCACGTGGA TCGCGACCGT GAGCGCGGAC ATAGACGCCG CGTTGAGCCG CACCTTGCGA CCGGTGCGCC TTGGGCTCCC CGCGCGAGAA GGGCTGACTT CACTGGAAGC CGATGCAGTG GGCGAGCTGG CGCTGATGCA TCGGCTGCTC AACGAGCGGA TGCGTGAGGC GAGGGGATAG
|
Protein sequence | MLNRKSNPSS SSQRWSNWLY AVVSAIYRKR PVWMVSFSTS EASLSEGLRA ACASTAMLAL GNLLHEPTFA WAAIGAFWTC LADAGGSNRA RFASMMGFAV LSTLCGGLTA YASGAGAVFA ALAVLVFTTI GAFGRIWGAA TSQVTILAAT ACVVMVDRPM HSVRQGMAFL GIYLVGCLFA VALSLTVWRI HPFGTSRSSL RAVYLRLADI AVDSARLLER RAARGEWATH AAKFRADARA ALERSRKVLA RVPASRTGGR ETYDTLLGLL TDSEALFAYL IAVSGACERV PDDAWRAQRA ARLLTVMGDV LRGIGAAAND AQWARLADLQ LRLRRFARRL ETALMEPVTL KSDFELVDFT PVHAEPEGWR DNAARLFTRV WSTFKANLSV ESVGLRHAAR VGVTTTTGFL VIRALGLPFG YWATMATLLI LQPSIAATWP RSIERAAGSI VGGVLAAAIG YAIHSPLGIS LAVFPLVMAT MALRPVSYSL FVLFLTPTFV LVADFATPGA SEFAYALTRL GNNVLGCVLA LLATFYLWPT REKIDYRAYL SEAVRANLAY LKAAMESPRR SEKEMERLRR AAGLGSNNAE EAIGRMRLEK LEDSMVDTVT LTVLSLLRRM AGTATQLRLS MNRRDMHDEL GTWIATVSAD IDAALSRTLR PVRLGLPARE GLTSLEADAV GELALMHRLL NERMREARG
|
| |