6 homologs were found in PanDaTox collection
for query gene RS02597 on replicon NC_003296
Organism: Ralstonia solanacearum GMI1000



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_003296  RS02597  hypothetical protein  100 
 
 
105 aa  199  9e-51  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_010678  Rpic_4247  Flp pilus assembly protein CpaB  66.67 
 
 
307 aa  117  7.999999999999999e-26  Ralstonia pickettii 12J  Bacteria  normal  normal  0.262876 
 
 
-
 
NC_012857  Rpic12D_4357  Flp pilus assembly protein CpaB  66.67 
 
 
307 aa  117  7.999999999999999e-26  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_007974  Rmet_3653  pilus assembly protein  42.34 
 
 
319 aa  60.1  0.00000001  Cupriavidus metallidurans CH34  Bacteria  normal  0.588333  normal 
 
 
-
 
NC_007348  Reut_B5408  Flp pilus assembly CpaB  43.22 
 
 
318 aa  50.1  0.00001  Ralstonia eutropha JMP134  Bacteria  normal  0.842409  n/a   
 
 
-
 
NC_012791  Vapar_4444  Flp pilus assembly protein CpaB  31.62 
 
 
331 aa  41.2  0.005  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
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