| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_4247 |
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| Symbol | |
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| ID | 6285732 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010678 |
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| Strand | + |
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| Start bp | 537152 |
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| End bp | 538075 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642618730 |
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| Product | Flp pilus assembly protein CpaB |
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| Protein accession | YP_001892771 |
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| Protein GI | 187926426 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3745] Flp pilus assembly protein CpaB |
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| TIGRFAM ID | [TIGR03177] Flp pilus assembly protein CpaB |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.262876 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAGCA AACACCTTCA GATCTTCGCC GCCGCGCTAT TGCTGCTCGC CGCCATTCTT
GGCGCCGTGG CATGGAAGTC GGCGCATCGC CCGCCGGCGC CCGTGGCCGA GCAGAAAGAT
GGCAAAGCGG TCTATCCCGT GGTCGTGACC ACGAAACCGC TGGAGGCGGG CAAGCCCATC
ACCGCAGACC AGGTGGCCAT CGAGCAACTG CCCATCAATC CGGCCGAAGC GTTTTCCGAC
GTCACGAAGG TCGTCGGGCG TGAACCCATT CTGCCGGTCG GCGTTGGTGT GCCGCTGATT
GCGTCGCAAC TTTCCTCCGG ATTGGCGCAG CAGGTCGAGG CCGGTCAGCG CGCGGTTGCC
ATCAACGTGG ACGAGGTGGT CGGCGTGGGC AATCGCGTTA TGCCGGGCGA TTACGTCGAT
GTGTTTCTCG TGATGCGTAA GGACGGTCAG GAGATCGAAG ACAGCCAGGC GCGCCTGCTG
CTGCCGCACC TGCGGGTCCT GGCGTTTGGC CCGCTGGCCA TCAATGAAGG GCCGCAGAAG
CAGCCCGAGA ACAGCGGGGT CACGCGCAAG GTCGATCAGG CCAAGACGGC CGTGCTGGCC
GTGCCGGTGG AGGCTGTCAG CCAGCTGGCG ATGGCACACC AGAGCGGTCG TCTGCTGCTG
GCGCTGCGCA ACCCAGGGGA CGACGCCGAA CCGACCGTCA AACCGCAGGA TGCCGCATTG
CTGGCGGCCG CCAACCGCAA CCCGATGGAC GTCGCACAAG CCGGCGTGTC GATGGCCAGC
CTGACGGGCT CGGCGCGCAG GCTGGTCGTT GTGCCGCCGC CGCTGCCGGC CATTGCCGCG
GCCCGCACGA CGGTGCGCAG CAGTACCGCC AGCACTGGTG TCGAGATCAT CCGCGCAGGA
AAACGTGAGG AGCAACATGA CTGA
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| Protein sequence | MTSKHLQIFA AALLLLAAIL GAVAWKSAHR PPAPVAEQKD GKAVYPVVVT TKPLEAGKPI
TADQVAIEQL PINPAEAFSD VTKVVGREPI LPVGVGVPLI ASQLSSGLAQ QVEAGQRAVA
INVDEVVGVG NRVMPGDYVD VFLVMRKDGQ EIEDSQARLL LPHLRVLAFG PLAINEGPQK
QPENSGVTRK VDQAKTAVLA VPVEAVSQLA MAHQSGRLLL ALRNPGDDAE PTVKPQDAAL
LAAANRNPMD VAQAGVSMAS LTGSARRLVV VPPPLPAIAA ARTTVRSSTA STGVEIIRAG
KREEQHD
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