Gene Reut_B5408 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagReut_B5408 
Symbol 
ID3612474 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia eutropha JMP134 
KingdomBacteria 
Replicon accessionNC_007348 
Strand
Start bp2194557 
End bp2195513 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content69% 
IMG OID637694833 
ProductFlp pilus assembly CpaB 
Protein accessionYP_299597 
Protein GI73539230 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3745] Flp pilus assembly protein CpaB 
TIGRFAM ID[TIGR03177] Flp pilus assembly protein CpaB 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.842409 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCAGTA AGCAGATACG GATTGTCGCC ATTGCCCTGC TCAGCGTGGC GCTGCTGCTC 
GCGCTGCTGG CCTGGCAGGT GGGACGCCAG CCAGAACCCC CACCGGTGTC CCGGGCCGCG
GCGGCGGTTC CGCATCCGGT GGTCGTGACG GCGCGTGCGG TGGAAGCGGG CAAGCCCCTG
CCTGCCGACG CGCTGAAGGT CGAAATGCTG CCGATCGAGC CCACGGGCGC CTATGCCGAG
GTGACACGCG TGGCAGGACA GGTGCCGCTG GTCAATATCG GCGCGAACGT CCCGGTTCTC
GAAAGCCAGC TGCTCGCGGG ACTGGCCGCG CAGATCCCCG AAGGCGAGCG CGCGGTGGCG
ATCGCCGTGG ACGAAGTGAT TGGCGTCGGC AACCAGGTAC AGCCGGGGGA CTATGTCGAC
GTATTTCTGG TCCTGCGGCG CGACAGCCAG GAGATCGGCG CCAGCCAGGC CCGCATGCTG
CTGCCCAGGC TGCGCGTGCT TGCCTACGGC AGCGGCGCAG TCAACGAACC GCAAAAGCAG
CAGCCTGAAC AGATGATGAC GCGCCGCGAA GGCGCCAAGA CCGCCGTGCT GTCCGTACCG
TTGGAACAGG TCAGCAAGCT GGCCATGGCT CAGCACTCCG GCCGCCTGCT GATGGCGCTG
CGCAATCCGC ACGATGAACT CATTCCCAGC GACGGCATGT TCTCCGAGCC TCCGCCAGCG
CTGGCCGTGC GCGCTGGCGT GCCGGCCGAC GCACCAAGCG CCGCAGCCGA CAAGGCAGTG
GCCGGCGTGA TGCTGGCGGG CATGGCGGCT GGCAGCACAC CATCGGCACG TGCGCCGAAC
ACGGCGGCAC CGCAAGTCAG GCCGCAGAGT GTGGCGCCTG TAGCGGGACA GGGCCGGCCG
GAACGGCAGC TTGCGGGTGT GGAAGTGATT CGCGCAGGCA AGCGCGAGAT CGAATAG
 
Protein sequence
MTSKQIRIVA IALLSVALLL ALLAWQVGRQ PEPPPVSRAA AAVPHPVVVT ARAVEAGKPL 
PADALKVEML PIEPTGAYAE VTRVAGQVPL VNIGANVPVL ESQLLAGLAA QIPEGERAVA
IAVDEVIGVG NQVQPGDYVD VFLVLRRDSQ EIGASQARML LPRLRVLAYG SGAVNEPQKQ
QPEQMMTRRE GAKTAVLSVP LEQVSKLAMA QHSGRLLMAL RNPHDELIPS DGMFSEPPPA
LAVRAGVPAD APSAAADKAV AGVMLAGMAA GSTPSARAPN TAAPQVRPQS VAPVAGQGRP
ERQLAGVEVI RAGKREIE