6 homologs were found in PanDaTox collection
for query gene RPD_0985 on replicon NC_007958
Organism: Rhodopseudomonas palustris BisB5



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007958  RPD_0985  putative dehydrogenase  100 
 
 
70 aa  140  6e-33  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.0851571  normal 
 
 
-
 
NC_007778  RPB_0875  6-phosphogluconate dehydrogenase, NAD-binding  67.44 
 
 
309 aa  61.2  0.000000004  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.651472  normal  0.39983 
 
 
-
 
NC_011004  Rpal_5180  Phosphogluconate dehydrogenase, NAD-binding, putative-like protein  49.18 
 
 
309 aa  59.3  0.00000002  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_0336  6-phosphogluconate dehydrogenase, NAD-binding  48.08 
 
 
308 aa  55.1  0.0000003  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_3634  phosphogluconate dehydrogenase, NAD-binding,-like protein  60.53 
 
 
313 aa  53.1  0.000001  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.75811 
 
 
-
 
NC_009485  BBta_2699  dehydrogenase  58.33 
 
 
312 aa  48.5  0.00003  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.647846  normal  0.600019 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>