8 homologs were found in PanDaTox collection
for query gene RPB_3406 on replicon NC_007778
Organism: Rhodopseudomonas palustris HaA2



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007778  RPB_3406  hypothetical protein  100 
 
 		 206 aa  408  1e-113  Rhodopseudomonas palustris HaA2  Bacteria  normal  1  normal  0.530597 
 
 
-
 
NC_007958  RPD_2042  hypothetical protein  65.53 
 
 		 204 aa  219  1.9999999999999999e-56  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.352558  normal  0.196025 
 
 
-
 
NC_011004  Rpal_2175  hypothetical protein  50 
 
 		 185 aa  160  2e-38  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.0615204  n/a   
 
 
-
 
NC_007925  RPC_3594  hypothetical protein  55.12 
 
 		 198 aa  135  3.0000000000000003e-31  Rhodopseudomonas palustris BisB18  Bacteria  normal  1  normal  0.597636 
 
 
-
 
NC_009485  BBta_6392  hypothetical protein  33.85 
 
 		 197 aa  87  2e-16  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.078003  normal  1 
 
 
-
 
NC_009485  BBta_1413  hypothetical protein  37.72 
 
 		 154 aa  76.6  0.0000000000002  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.22814  normal  0.11454 
 
 
-
 
NC_007925  RPC_3467  peptidase  28.38 
 
 		 233 aa  72.8  0.000000000004  Rhodopseudomonas palustris BisB18  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011004  Rpal_2538  hypothetical protein  26.21 
 
 		 218 aa  51.2  0.00001  Rhodopseudomonas palustris TIE-1  Bacteria  normal  1  n/a   
 
 
-
 
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