Gene RPD_2042 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_2042 
Symbol 
ID4022524 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2290458 
End bp2291072 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content60% 
IMG OID637962235 
Producthypothetical protein 
Protein accessionYP_569178 
Protein GI91976519 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.352558 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.196025 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGTGC GTATGGCTCT CACAGCGCTG ACGACGGCGT TGCTGTTGCT CGGTCAGGCG 
TCCGTTGTGC ATTCCGCGCT TGAGCTTCCG GATGCAATTG AAGATCCGGC CGGGACGTCC
AACCAGGAAC AAGCCGGACC GATCGTCGGA TCCGGCGCGG ACATTGTCCG GATCGTGGAA
AAGAACCTGA TCGGATTCAG GGTCTATGAT CTCAGCTTCA ACGGCGACGG CGCCGCGCCA
TCGTTCGACG TCAAATCCTA TCGCGGCGAC AGGATCTGGA ACACCGTGGT CGACGCCACG
ACACGACAGA TCGTTCGGTC CGCGATGGTG ATGTCGACGT CCGACCTGCA CGGCGAAGAC
CGGAGGAATA TCGACGACTT CAAGCGATCG AGGATGGCTC TTTCCGAAGC GATTGCGATT
GCCGAGAAAT ACGGCCCTGG CAATGCGATC AGTGCAGGGC TTCACCACGC CGGCGGCAGA
TTGGTGTTCG TGGTGGTTGT TGTTTCCAAC GGTGAGCTGA AGGAGATCGT GATCCGTGCG
GACCGCGATA AGCGGGGAAG GCGGCTCGAT ACGGAGAATC CGGTCAGCGA TGGCGCGCTA
CGCGCGCCTG CGTGA
 
Protein sequence
MSVRMALTAL TTALLLLGQA SVVHSALELP DAIEDPAGTS NQEQAGPIVG SGADIVRIVE 
KNLIGFRVYD LSFNGDGAAP SFDVKSYRGD RIWNTVVDAT TRQIVRSAMV MSTSDLHGED
RRNIDDFKRS RMALSEAIAI AEKYGPGNAI SAGLHHAGGR LVFVVVVVSN GELKEIVIRA
DRDKRGRRLD TENPVSDGAL RAPA