Gene RPB_3406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_3406 
Symbol 
ID3911208 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp3892127 
End bp3892747 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content67% 
IMG OID637885309 
Producthypothetical protein 
Protein accessionYP_487013 
Protein GI86750517 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.530597 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGTAC GTATCGTCCT GTCGACGCTG ACGGCGGCAT CGCTGCTGCT CGGCCTGACG 
TCGGCGGTCC AGTCCGCGCG CGAGCCGCGC GCGCTGGATG CGGGCGCCAC AGAGGAGGCC
ACCGACGAAA CCGGGTCGCT GCCGCTCGCC GCCGGCTCCG GCGCGGATCT CGTCCGGATG
GTGGAGAGCA GCCTGACCGG CGCCAGGGTC TATGATCTGA GCTTCAACGG CGACGGCGCA
GCGCCGTCGT TCGAGGTCAA ATCCTATCGC GACGACAACA TCTGGAAGAC GGTGGTCGAT
GCCGCGACGC GCCGGATCGT CCGCTCCGCG GTCGTGATGC CGGCCTCCGA TCTGCATGCC
GAGGACAAGC GCGGCATCGA CGACTTCAAG CGCTCGAGCA TGGCGCTGGC CGATGCGATC
GCGATCGCCG AAAAATACGG GCCGGGCAAG GCGATCAGCG CCGGCCTCCA CCACGCCGAC
GGCAAATTGG TGTTCGTCGT GGTCGTCGTC TCCAATGGCG GACTGAAGGA GATCGTGATC
CGTTCGGATG GGAAAAAGCG CGGCGAGCGG CGCAAGATGG AGCAACGCCC GGACGACAGC
GTCCGACGGA TGCCGGGCTG A
 
Protein sequence
MSVRIVLSTL TAASLLLGLT SAVQSAREPR ALDAGATEEA TDETGSLPLA AGSGADLVRM 
VESSLTGARV YDLSFNGDGA APSFEVKSYR DDNIWKTVVD AATRRIVRSA VVMPASDLHA
EDKRGIDDFK RSSMALADAI AIAEKYGPGK AISAGLHHAD GKLVFVVVVV SNGGLKEIVI
RSDGKKRGER RKMEQRPDDS VRRMPG