8 homologs were found in PanDaTox collection
for query gene BBta_6392 on replicon NC_009485
Organism: Bradyrhizobium sp. BTAi1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009485  BBta_6392  hypothetical protein  100 
 
 
197 aa  399  9.999999999999999e-111  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.078003  normal 
 
 
-
 
NC_007925  RPC_3467  peptidase  40.91 
 
 
233 aa  144  7.0000000000000006e-34  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_1413  hypothetical protein  40.41 
 
 
154 aa  120  9.999999999999999e-27  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.22814  normal  0.11454 
 
 
-
 
NC_007925  RPC_3594  hypothetical protein  32.64 
 
 
198 aa  110  1.0000000000000001e-23  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.597636 
 
 
-
 
NC_011004  Rpal_2538  hypothetical protein  41.1 
 
 
218 aa  106  3e-22  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_3406  hypothetical protein  33.85 
 
 
206 aa  73.6  0.000000000002  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.530597 
 
 
-
 
NC_011004  Rpal_2175  hypothetical protein  33.6 
 
 
185 aa  71.2  0.000000000009  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.0615204  n/a   
 
 
-
 
NC_007958  RPD_2042  hypothetical protein  33.08 
 
 
204 aa  69.3  0.00000000003  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.352558  normal  0.196025 
 
 
-
 
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