14 homologs were found in PanDaTox collection
for query gene Psyr_2792 on replicon NC_007005
Organism: Pseudomonas syringae pv. syringae B728a



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007005  Psyr_2792  Phage putative head morphogenesis protein, SPP1 gp7  100 
 
 
362 aa  741    Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.805909  normal  0.139612 
 
 
-
 
NC_008044  TM1040_0803  phage putative head morphogenesis protein, SPP1 gp7  36.71 
 
 
349 aa  212  5.999999999999999e-54  Ruegeria sp. TM1040  Bacteria  normal  0.558654  hitchhiker  0.0000350456 
 
 
-
 
NC_010322  PputGB1_3417  SPP1 family phage head morphogenesis protein  33.69 
 
 
347 aa  191  1e-47  Pseudomonas putida GB-1  Bacteria  normal  unclonable  1.53739e-16 
 
 
-
 
NC_009512  Pput_3378  SPP1 family phage head morphogenesis protein  33.06 
 
 
348 aa  187  3e-46  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_3238  hypothetical protein  33.59 
 
 
369 aa  173  3.9999999999999995e-42  Delftia acidovorans SPH-1  Bacteria  normal  hitchhiker  0.0000506373 
 
 
-
 
NC_010159  YpAngola_A2192  hypothetical protein  29.08 
 
 
370 aa  144  3e-33  Yersinia pestis Angola  Bacteria  normal  normal  0.743818 
 
 
-
 
NC_009656  PSPA7_2406  hypothetical protein  30.39 
 
 
359 aa  120  3e-26  Pseudomonas aeruginosa PA7  Bacteria  normal  0.975595  n/a   
 
 
-
 
NC_009012  Cthe_2476  SPP1 family phage head morphogenesis protein  30.83 
 
 
469 aa  55.5  0.000001  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_2969  SPP1 family phage head morphogenesis protein  30.83 
 
 
518 aa  54.3  0.000003  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_008527  LACR_2104  NAD+--asparagine ADP-ribosyltransferase  31.58 
 
 
368 aa  46.6  0.0006  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  n/a   
 
 
-
 
NC_013517  Sterm_1428  phage head morphogenesis protein, SPP1 gp7 family  27.7 
 
 
641 aa  45.1  0.002  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_008530  LGAS_0607  Phage Mu protein F like protein  29.92 
 
 
510 aa  44.7  0.003  Lactobacillus gasseri ATCC 33323  Bacteria  decreased coverage  0.0000000125441  normal 
 
 
-
 
NC_008530  LGAS_0669  Phage Mu protein F like protein  29.92 
 
 
510 aa  44.7  0.003  Lactobacillus gasseri ATCC 33323  Bacteria  decreased coverage  0.000000892912  normal 
 
 
-
 
NC_002976  SERP0879  hypothetical protein  32.18 
 
 
448 aa  43.1  0.007  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
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