Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_3238 |
Symbol | |
ID | 5748822 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 3547958 |
End bp | 3549067 |
Gene Length | 1110 bp |
Protein Length | 369 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641298341 |
Product | hypothetical protein |
Protein accession | YP_001564261 |
Protein GI | 160898679 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.0000506373 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGGCCTCGG TCAATGACCT GATTCTCTCG GAAGCCATCC GGCACATGGT CGCGCTGCAA CGGTACGACA ACGGAGTCGT GGCGCGCATC ATCGCGCTTC TGAACCGCTC GGACCTGCGG CTGATGGCTG AACTGACCGC CAGGCTGGAA GGCCTGGACG CTGGCAGCTT CACCATGCAG CGGCTGGAGT CGCTGCTCAC GTCCATCTGG TCGCTGAACA GCGAGGCCTA CGCCCAGTTG GGCAGGGCCC TGACTGAAGA GCTGAAGCAG TTCGTTCCCT ACGAGGTCAG CTACCAGGAG CAGATGCTCA AGACGCATTT GCCGGTGGGC GTGCACGTGG CGGCAGTCTC GGCAGAGCAG ATCTACGCTG CGGCGCTGTC TCGGCCATTC CAGGGCTTGC TGCTGCAGGG CGTCTGGAGC GATCTGGACG CCGGCAAGCT CAAGCGCGTG AGGCAAGCCA TCGCCCAGGG CTTTGTCGAG GGCAAGACCA CCGACCAAAT CATCCGAGAG CTGCGCGGCA CGCGGGCCAA GGGCTACATC GACGGGTTGA TCCAGAAGGA TCGCCGGGAC ATTGAGGCGG TCGTGCGGAC GGCGCTGGCT CACATGGCCG GAGTGGCGCA GGACAACGTG ATGGAGGCCA ATGCTGACCT GATCAAGGCT GCCATGTGGT CATCGACCCT CGATCTCCGC ACGTCGCCGA TGTGCCGCAT CCGTGACCGG CTGCTGTACA CGCCCGACAC GCACAAGCCA ATCGGCCACA AGGTGCCGTG GCTGAGCGGC CCGGGCCGGC TGCACTGGCG CTGCCGCTCT GGTCAGGTGC CAGTGCTCAA GAGCCACAAG GAGCTGGGCA TCGATCTGCC GGACATCGAG GTCAACGGGC GCACACGGGC CAGCATGGAC GGCCAGGTGC CGAAGGAGAC GAGCTACGCC GACTGGCTGA AGAACCAATC CCTGGCGCGC CAGACCGATG TGCTCGGCGA GACCCGGGCC AGGCTGATGC GCGACGGCAA GCTGGGGATG GATGCGATGT ACGACTCGAA GGGCCGCTAT CTCACTCTCG ATGAGCTGAG GCAGCGGGAT GCAGAGGCTT TCAAGCGGGC CGGGCTGTAG
|
Protein sequence | MASVNDLILS EAIRHMVALQ RYDNGVVARI IALLNRSDLR LMAELTARLE GLDAGSFTMQ RLESLLTSIW SLNSEAYAQL GRALTEELKQ FVPYEVSYQE QMLKTHLPVG VHVAAVSAEQ IYAAALSRPF QGLLLQGVWS DLDAGKLKRV RQAIAQGFVE GKTTDQIIRE LRGTRAKGYI DGLIQKDRRD IEAVVRTALA HMAGVAQDNV MEANADLIKA AMWSSTLDLR TSPMCRIRDR LLYTPDTHKP IGHKVPWLSG PGRLHWRCRS GQVPVLKSHK ELGIDLPDIE VNGRTRASMD GQVPKETSYA DWLKNQSLAR QTDVLGETRA RLMRDGKLGM DAMYDSKGRY LTLDELRQRD AEAFKRAGL
|
| |