Gene Daci_3238 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3238 
Symbol 
ID5748822 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp3547958 
End bp3549067 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content65% 
IMG OID641298341 
Producthypothetical protein 
Protein accessionYP_001564261 
Protein GI160898679 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0000506373 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCCTCGG TCAATGACCT GATTCTCTCG GAAGCCATCC GGCACATGGT CGCGCTGCAA 
CGGTACGACA ACGGAGTCGT GGCGCGCATC ATCGCGCTTC TGAACCGCTC GGACCTGCGG
CTGATGGCTG AACTGACCGC CAGGCTGGAA GGCCTGGACG CTGGCAGCTT CACCATGCAG
CGGCTGGAGT CGCTGCTCAC GTCCATCTGG TCGCTGAACA GCGAGGCCTA CGCCCAGTTG
GGCAGGGCCC TGACTGAAGA GCTGAAGCAG TTCGTTCCCT ACGAGGTCAG CTACCAGGAG
CAGATGCTCA AGACGCATTT GCCGGTGGGC GTGCACGTGG CGGCAGTCTC GGCAGAGCAG
ATCTACGCTG CGGCGCTGTC TCGGCCATTC CAGGGCTTGC TGCTGCAGGG CGTCTGGAGC
GATCTGGACG CCGGCAAGCT CAAGCGCGTG AGGCAAGCCA TCGCCCAGGG CTTTGTCGAG
GGCAAGACCA CCGACCAAAT CATCCGAGAG CTGCGCGGCA CGCGGGCCAA GGGCTACATC
GACGGGTTGA TCCAGAAGGA TCGCCGGGAC ATTGAGGCGG TCGTGCGGAC GGCGCTGGCT
CACATGGCCG GAGTGGCGCA GGACAACGTG ATGGAGGCCA ATGCTGACCT GATCAAGGCT
GCCATGTGGT CATCGACCCT CGATCTCCGC ACGTCGCCGA TGTGCCGCAT CCGTGACCGG
CTGCTGTACA CGCCCGACAC GCACAAGCCA ATCGGCCACA AGGTGCCGTG GCTGAGCGGC
CCGGGCCGGC TGCACTGGCG CTGCCGCTCT GGTCAGGTGC CAGTGCTCAA GAGCCACAAG
GAGCTGGGCA TCGATCTGCC GGACATCGAG GTCAACGGGC GCACACGGGC CAGCATGGAC
GGCCAGGTGC CGAAGGAGAC GAGCTACGCC GACTGGCTGA AGAACCAATC CCTGGCGCGC
CAGACCGATG TGCTCGGCGA GACCCGGGCC AGGCTGATGC GCGACGGCAA GCTGGGGATG
GATGCGATGT ACGACTCGAA GGGCCGCTAT CTCACTCTCG ATGAGCTGAG GCAGCGGGAT
GCAGAGGCTT TCAAGCGGGC CGGGCTGTAG
 
Protein sequence
MASVNDLILS EAIRHMVALQ RYDNGVVARI IALLNRSDLR LMAELTARLE GLDAGSFTMQ 
RLESLLTSIW SLNSEAYAQL GRALTEELKQ FVPYEVSYQE QMLKTHLPVG VHVAAVSAEQ
IYAAALSRPF QGLLLQGVWS DLDAGKLKRV RQAIAQGFVE GKTTDQIIRE LRGTRAKGYI
DGLIQKDRRD IEAVVRTALA HMAGVAQDNV MEANADLIKA AMWSSTLDLR TSPMCRIRDR
LLYTPDTHKP IGHKVPWLSG PGRLHWRCRS GQVPVLKSHK ELGIDLPDIE VNGRTRASMD
GQVPKETSYA DWLKNQSLAR QTDVLGETRA RLMRDGKLGM DAMYDSKGRY LTLDELRQRD
AEAFKRAGL