Gene Psyr_2792 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2792 
Symbol 
ID3368310 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp3374929 
End bp3376017 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content59% 
IMG OID637653141 
ProductPhage putative head morphogenesis protein, SPP1 gp7 
Protein accessionYP_235869 
Protein GI66046028 
COG category 
COG ID 
TIGRFAM ID[TIGR01641] phage putative head morphogenesis protein, SPP1 gp7 family 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.805909 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.139612 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGTCA ACCAAGCGGT ACTTGATGCC ACGATTCGGC ACTCGGTGTT CCTGGAGCAA 
CTGAAGGCTG GTGAGGTCGA GAAATTCGCT CCTTTCCTCA AAGAGATCGA CCGGGCGGTG
CGCGAGCAGC TCACCAATGC CGACCTGAGT GAGTACAACA TCAAGCGGCT GAACCAGCTG
CTCGACGAGG TCGACAGCCT TCTGCTCGGC ATCTTCGACC GCTATACCAC GACGCTGAAT
CTTGATCTGA TCGACCTGGC CAACTACGAG GCTCAGTTCG AAGCAACGGT GCTATCCCGG
TCCGCGCCTG TCGGTGTTAC CTTTGATGCA TTGGTCCCGC CAGCACGCGC GATCCGCTCG
GCGGTGCTCA ACAACCCGCT CAGCGTGCGC GACAACGGCG GCGGCAAGCT GCTGGAGCCA
TTCATCAAGG ATTGGGCAAC TACCGAGCGC GAGCGCGTCA GTGGTGCAAT CAGGCAAGGA
TTCTTTGAAG GGCAGACGAA CTTTCAGGTC ATCCTCAAGA TTCGCGGCAC CAAGGCTGCG
GGGTACAGCG ACGGGATACT GGCGACGACC AAGCGCAATG CCAGTGCAGT AGTGCACACG
GCTGTGCAGC ATGTGGCATC GCAGGCCCGG ATGGAGACGA TCAAGGCCAA TCCTGATGTT
GTCGCTGAGA TTGAGATCGT CGCGACCCTC GATAGCAAGA CCACCCAGAC CTGTAGGTCG
ATGGATAAGC GCCGCTTTCC AGTCGATTCT GGGCCGCGAC CACCGTTTCA TATCAGGTGC
CGGACGACCT TCGTGCCTGT GACCAAATGG ACCAAGTTCC TCAGCAAGGA TGCTACCCGC
GCCTCGGTGG GGCCGAACGG CGGAGGCCAG GTGGCGGCCG ATCTGAGCTA TTACGATTGG
CTGAAGCTCC AACCTTCGGC GTTTCAGGAT CAGGCGCTTG GCCCGACTCG TGGCAGGCTA
TTCCGCGATG GCGGGCTAAC ACTAGAGCGC TTCGCGGAGC TCCAGCTAGA CCGTAACTTC
AAGCCGCTGA CGCTGGAGCA GATGAAAAGG CTTGAGCCGC TGGCATTCGA ACGAGCCAAA
TTAGATTGA
 
Protein sequence
MAVNQAVLDA TIRHSVFLEQ LKAGEVEKFA PFLKEIDRAV REQLTNADLS EYNIKRLNQL 
LDEVDSLLLG IFDRYTTTLN LDLIDLANYE AQFEATVLSR SAPVGVTFDA LVPPARAIRS
AVLNNPLSVR DNGGGKLLEP FIKDWATTER ERVSGAIRQG FFEGQTNFQV ILKIRGTKAA
GYSDGILATT KRNASAVVHT AVQHVASQAR METIKANPDV VAEIEIVATL DSKTTQTCRS
MDKRRFPVDS GPRPPFHIRC RTTFVPVTKW TKFLSKDATR ASVGPNGGGQ VAADLSYYDW
LKLQPSAFQD QALGPTRGRL FRDGGLTLER FAELQLDRNF KPLTLEQMKR LEPLAFERAK
LD