8 homologs were found in PanDaTox collection
for query gene PsycPRwf_1308 on replicon NC_009524
Organism: Psychrobacter sp. PRwf-1



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009524  PsycPRwf_1308  hypothetical protein  100 
 
 
443 aa  909    Psychrobacter sp. PRwf-1  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_3056  pyocin R2_PP, tail fiber protein, putative  30.56 
 
 
292 aa  51.6  0.00003  Pseudomonas putida KT2440  Bacteria  normal  normal  0.172022 
 
 
-
 
NC_010322  PputGB1_1209  putative pyocin R2_PP, tail fiber protein  28.26 
 
 
228 aa  51.6  0.00003  Pseudomonas putida GB-1  Bacteria  normal  hitchhiker  0.00391701 
 
 
-
 
NC_012880  Dd703_3816  Tail Collar domain protein  29.81 
 
 
498 aa  47.4  0.0005  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_008698  Tpen_1705  hypothetical protein  25.88 
 
 
271 aa  45.1  0.003  Thermofilum pendens Hrk 5  Archaea  normal  0.594083  n/a   
 
 
-
 
NC_010511  M446_4133  pyocin R2_PP, tail fiber protein, putative  23.12 
 
 
187 aa  43.9  0.006  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.586473 
 
 
-
 
NC_009783  VIBHAR_01992  hypothetical protein  27.04 
 
 
177 aa  43.1  0.01  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009829  Spro_4955  hypothetical protein  32.29 
 
 
616 aa  43.1  0.01  Serratia proteamaculans 568  Bacteria  normal  0.0194752  normal 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>