| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_1705 |
|---|
| Symbol | |
|---|
| ID | 4601667 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermofilum pendens Hrk 5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008698 |
|---|
| Strand | + |
|---|
| Start bp | 1645719 |
|---|
| End bp | 1646534 |
|---|
| Gene Length | 816 bp |
|---|
| Protein Length | 271 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 639774478 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_921103 |
|---|
| Protein GI | 119720608 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5493] Uncharacterized conserved protein containing a coiled-coil domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.594083 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCATTC CATCCATTGA CTGGTCCAGG CTCGAAGAGG TAGTCGAAAG AGCCGTGAGG
AGAGCTAGGG CCGATGAGCT GAGAGACCTA GCCGAGGCCG TCAAAGTGCT CGCCGAGTAC
ATGAAGACAG GCTTCGAAAG CACGCTCAGA GCCATAGAGG ACCACTCCAA GATGATAGAG
GAGCTAACCA AGGAGGTCAG AAATAACTCC AGAATCCTCG AAGAACACTC GAAAGTCCTT
GGAGAGCATT CTAGGAGAAT AGAAGAACTG GCCGGAGAGA TCAGAAATCA CTCCAGAGTC
CTCGAAGAGC ACTCCAAGAG ATTAGAGGAG CTAACCAGGG AGGTCAGAAA TCACTCTAGA
ATCCTTGAAG AACACTCCGA GAGGCTGAAA GAGCTGACCA AGAGCGTGGG AGAGCTGAAG
GCCGCCGTAG GGTCCATCGG CAGGAGGTGG GGCAGGGACC TCGAGAAGCT CGTCTACGAG
CTGTACAAAG ACGCGCTGCT AGGACTCGGC GTGAAGGACG TCGGCAAGAT AGAAAAGTAC
ACGTACGTCG ACATAGACGG GAAGTACTAC AGGAGAGGCG CCAGGATAGA GCTAGACATA
TACATGCACG ACACCAGCGT CTACTTCATC GAGGTGAAAA GCCTCCTGGA AGTAGACGAC
GTGTACTGGT TCAACGAGAA GTGCGGCATC GTATCCAAGA TCATAGGCAG AACGCCGACC
AGGAGAATCA TCGTAGCAGT GAACGCCGCG AAGGAAGCCA TCGAAGCAGC ACGAGAACTC
GGCATCGACG TAGTCTACGG CTCGATAGTA GACTGA
|
|---|
| Protein sequence | MAIPSIDWSR LEEVVERAVR RARADELRDL AEAVKVLAEY MKTGFESTLR AIEDHSKMIE
ELTKEVRNNS RILEEHSKVL GEHSRRIEEL AGEIRNHSRV LEEHSKRLEE LTREVRNHSR
ILEEHSERLK ELTKSVGELK AAVGSIGRRW GRDLEKLVYE LYKDALLGLG VKDVGKIEKY
TYVDIDGKYY RRGARIELDI YMHDTSVYFI EVKSLLEVDD VYWFNEKCGI VSKIIGRTPT
RRIIVAVNAA KEAIEAAREL GIDVVYGSIV D
|
|---|
| |