18 homologs were found in PanDaTox collection
for query gene PputW619_2013 on replicon NC_010501
Organism: Pseudomonas putida W619



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010501  PputW619_2013  extradiol ring-cleavage dioxygenase class III protein subunit B  100 
 
 		 272 aa  561  1.0000000000000001e-159  Pseudomonas putida W619  Bacteria  normal  0.270872  normal  0.392085 
 
 
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NC_007951  Bxe_A1146  2-aminophenol 1,6-dioxygenase, alpha subunit  57.25 
 
 		 270 aa  331  6e-90  Burkholderia xenovorans LB400  Bacteria  normal  1  normal  1 
 
 
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NC_010501  PputW619_2014  extradiol ring-cleavage dioxygenase class III protein subunit B  24.39 
 
 		 305 aa  78.6  0.0000000000001  Pseudomonas putida W619  Bacteria  normal  1  normal  0.523696 
 
 
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NC_013411  GYMC61_2301  Extradiol ring-cleavage dioxygenase class III protein subunit B  24.18 
 
 		 284 aa  75.1  0.000000000001  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
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NC_007951  Bxe_A1145  2-aminophenol 1,6-dioxygenase, beta subunit  24.82 
 
 		 304 aa  72  0.000000000009  Burkholderia xenovorans LB400  Bacteria  normal  1  normal  1 
 
 
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NC_013205  Aaci_1623  Extradiol ring-cleavage dioxygenase class III protein subunit B  24.54 
 
 		 269 aa  65.9  0.0000000006  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  1  n/a   
 
 
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NC_007794  Saro_2607  extradiol ring-cleavage dioxygenase III subunit B  25.34 
 
 		 290 aa  50.1  0.00004  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  1  n/a   
 
 
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NC_013595  Sros_7520  3,4-dihydroxyphenylacetate 2,3-dioxygenase  22 
 
 		 285 aa  47.4  0.0003  Streptosporangium roseum DSM 43021  Bacteria  normal  0.261436  normal  1 
 
 
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NC_009075  BURPS668_A0323  aromatic ring-opening dioxygenase  24.88 
 
 		 308 aa  45.1  0.001  Burkholderia pseudomallei 668  Bacteria  normal  1  n/a   
 
 
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NC_009078  BURPS1106A_A0233  aromatic ring-opening dioxygenase  24.88 
 
 		 308 aa  45.1  0.001  Burkholderia pseudomallei 1106a  Bacteria  normal  0.329446  n/a   
 
 
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NC_007435  BURPS1710b_A1686  putative dioxygenase  24.88 
 
 		 308 aa  45.1  0.001  Burkholderia pseudomallei 1710b  Bacteria  normal  1  n/a   
 
 
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NC_006349  BMAA1919  putative class III extradiol-type catecholic dioxygenase  24.88 
 
 		 308 aa  44.7  0.002  Burkholderia mallei ATCC 23344  Bacteria  normal  1  n/a   
 
 
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NC_008835  BMA10229_1220  aromatic ring-opening dioxygenase  24.88 
 
 		 308 aa  44.7  0.002  Burkholderia mallei NCTC 10229  Bacteria  normal  0.432018  n/a   
 
 
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NC_008784  BMASAVP1_0934  aromatic ring-opening dioxygenase  24.88 
 
 		 308 aa  44.7  0.002  Burkholderia mallei SAVP1  Bacteria  normal  1  n/a   
 
 
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NC_007952  Bxe_B2031  3,4-dihydroxyphenylacetate 2,3-dioxygenase(HpaD)  23.11 
 
 		 287 aa  44.3  0.002  Burkholderia xenovorans LB400  Bacteria  normal  0.412165  normal  0.21533 
 
 
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NC_010676  Bphyt_5827  3,4-dihydroxyphenylacetate 2,3-dioxygenase  21.8 
 
 		 287 aa  42.7  0.006  Burkholderia phytofirmans PsJN  Bacteria  normal  0.121868  normal  0.292113 
 
 
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NC_013216  Dtox_0324  hypothetical protein  23.96 
 
 		 467 aa  42.4  0.007  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.627251  normal  1 
 
 
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NC_007778  RPB_3868  3,4-dihydroxyphenylacetate 2,3-dioxygenase HpaD_Fe  23.9 
 
 		 283 aa  42.7  0.007  Rhodopseudomonas palustris HaA2  Bacteria  normal  1  normal  0.90869 
 
 
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