14 homologs were found in PanDaTox collection
for query gene Pnuc_0455 on replicon NC_009379
Organism: Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009379  Pnuc_0455  hypothetical protein  100 
 
 		 61 aa  125  2.0000000000000002e-28  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_010531  Pnec_1361  hypothetical protein  89.09 
 
 		 55 aa  103  8e-22  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria  normal  1  normal  0.281945 
 
 
-
 
NC_007973  Rmet_2042  cytochrome c oxidase subunit  69.05 
 
 		 55 aa  67.4  0.00000000006  Cupriavidus metallidurans CH34  Bacteria  normal  0.0208839  normal  1 
 
 
-
 
NC_007347  Reut_A2039  cytochrome C oxidase subunit  69.05 
 
 		 54 aa  66.6  0.0000000001  Ralstonia eutropha JMP134  Bacteria  normal  0.0319707  n/a   
 
 
-
 
NC_010682  Rpic_1106  conserved hypothetical signal peptide protein  61.9 
 
 		 60 aa  58.5  0.00000003  Ralstonia pickettii 12J  Bacteria  normal  0.0675956  normal  1 
 
 
-
 
NC_012856  Rpic12D_1199  putative signal peptide protein  61.9 
 
 		 60 aa  58.2  0.00000003  Ralstonia pickettii 12D  Bacteria  normal  0.329097  normal  1 
 
 
-
 
NC_003295  RSc1278  putative signal peptide protein  61.9 
 
 		 60 aa  57.4  0.00000006  Ralstonia solanacearum GMI1000  Bacteria  normal  1  normal  0.687203 
 
 
-
 
NC_008740  Maqu_1786  Cbb3-type cytochrome oxidase component  52.63 
 
 		 61 aa  50.1  0.00001  Marinobacter aquaeolei VT8  Bacteria  normal  0.569607  n/a   
 
 
-
 
NC_007298  Daro_0715  Cbb3-type cytochrome oxidase component  40.82 
 
 		 58 aa  43.9  0.0007  Dechloromonas aromatica RCB  Bacteria  hitchhiker  0.0000461704  normal  0.185395 
 
 
-
 
NC_007404  Tbd_0641  cytochrome c oxidase, subunit CcoQ  45.24 
 
 		 54 aa  43.1  0.001  Thiobacillus denitrificans ATCC 25259  Bacteria  hitchhiker  0.000266851  normal  0.653768 
 
 
-
 
NC_009439  Pmen_2606  Cbb3-type cytochrome oxidase component  48.65 
 
 		 64 aa  42.7  0.002  Pseudomonas mendocina ymp  Bacteria  decreased coverage  0.00000308016  normal  0.790893 
 
 
-
 
NC_007908  Rfer_1932  Cbb3-type cytochrome oxidase component  44.74 
 
 		 47 aa  41.2  0.005  Rhodoferax ferrireducens T118  Bacteria  normal  0.0250723  n/a   
 
 
-
 
NC_008781  Pnap_3780  Cbb3-type cytochrome oxidase component  51.35 
 
 		 48 aa  40.8  0.007  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.610701  normal  1 
 
 
-
 
NC_013456  VEA_003469  cytochrome c oxidase subunit CcoQ  51.35 
 
 		 57 aa  40  0.01  Vibrio sp. Ex25  Bacteria  normal  0.274679  n/a   
 
 
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