3 homologs were found in PanDaTox collection
for query gene Pmen_1550 on replicon NC_009439
Organism: Pseudomonas mendocina ymp



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009439  Pmen_1550  hypothetical protein  100 
 
 
88 aa  174  3e-43  Pseudomonas mendocina ymp  Bacteria  normal  0.358293  normal  0.656053 
 
 
-
 
NC_009439  Pmen_3636  D-lactate dehydrogenase  100 
 
 
590 aa  59.3  0.00000001  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_1165  hypothetical protein  100 
 
 
115 aa  58.5  0.00000003  Pseudomonas mendocina ymp  Bacteria  normal  0.183778  normal  0.18975 
 
 
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