| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3636 |
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| Symbol | |
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| ID | 5110097 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 4011777 |
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| End bp | 4013549 |
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| Gene Length | 1773 bp |
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| Protein Length | 590 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640504891 |
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| Product | D-lactate dehydrogenase |
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| Protein accession | YP_001189116 |
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| Protein GI | 146308651 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCTG CAGTCGCCAC CACCGTATCC CGAGACACCC TGCTGGCGCA GATGCGCCAG
ATCGTCGGCG ACAGCCATGT GCTGATCGAC GAGCAGGCCA CGCGGCGCTT TCGCAAGGGC
CATCGCACCG GTGAGGGCAA TGTCCTGGCA GTGGTGCGCC CCGGCTCGCT GCTGGAGCAG
TGGCGCGTCC TGCAGGCGGC GGTGGCGGCC GACCGCATCG TCATCATGCA GGCGGCCAAT
ACCGGCCTGA CCGGTGGCTC CACCCCCGAT GGCGACGACT ACGACCGCGA GATCGTGCTG
ATCAGCACCC TGCGCATCAC CGGCGTGCAG CTGATCAACG ATGGCCAGCA GGTGGTCTGC
CTGCCCGGCG CCACCCTGGA TCGCCTGGAG CAGGCGCTGG CGCCGCTGAA CCGCGAACCG
CATTCGGTGA TCGGCTCGTC CTGCATCGGC GCCTCGGTGC TCGGCGGCAT CTGCAACAAC
TCCGGCGGCG CCCTGGTGCG CCGCGGCCCG GCCTATACCG AACTGGCGCT GTACGCGCAG
GTGAAGGACG ACGGCTCGCT GGAGCTGGTC AACCATCTGG GGATCGAGCT GGGCGACAAC
CCCGAGGAGA TCCTCACCCG CCTGCAGAAC GGCGACTACA CGCCGCAGCA GGTGCGCAAC
GAGGAGCACG CCAAGGCTTC CGACGCGCGC TACGGCGAGC ACGTGCGCGA TGTCGATGCC
GACACCCCGG CGCGCTTCAA CGCCGACCCG TCGCGTCTGT TCGAAGCCTC CGGTTCGGCC
GGCAAGCTGT GCCTGTTCGC CGTGCGCCTG GACACCTTCC CGAAGGAGCC GAGCACGGTG
TTCTACATCG GCAGCAACGA CCCGCACGAC CTCACCGAAG TGCGCCGTCA CCTGCTGGCC
GAGCTGCCAC GCCTGCCGAT CGCTGGCGAG TACATCCATC GCACCGCCTT CGACATCGGC
GAGAAATACG GCAAGGACAC CTTCCTGGTG ATCGACAAAT TCGGCACCGC CAGGGTGCCG
GCCGCCTTCG CCATGAAGAG CCGAGTCGAC GGCTTCTTCG AGCGTTTCGG CCTACGCGGG
GTGACCGACC GGGTGATCCA GGCGCTGATG AACCTGCTGC CCAGCCACCT GCCGGCGCGC
ATGCGTGAGT ACCGTGACCG CTTCGAGCAT CACCTGCTGG TGCGGGTGTC CAACGACACC
CTGGAGCAGA CCCGCGCCTT CCTCACCGAG TATTTCACCG GTAGCGCCAG CGGCGCCTAT
TTCGAGTGCG ATGCCGATGA GGGACGCAAG GCCTTCCTGC ACCGCTTCGC CATCGCCGGC
GCCGCGATCC GCTACCGCGA GGCGCACCGC AGCAACGTCG AAGACATCCT CGCCCTGGAC
ATTGCCCTGC GCCGCAACGA CCGCGACTGG GTCGAGACGC TGCCGCAGGA GATGGAAGAG
CAGATCATCC ACAAGCTCTA CTACGGGCAC TTCTTCTGCC ACGTGTTCCA TCAGGACTAC
ATCGTCAGAA AGGGCATCGA CCCGATCGAG ATGGAGCACC GCATGTGGAA ACTGCTGGAC
GCACGCCGTG CCGAGTACCC GGCCGAGCAC AACGTCGGCC ACCTGTACGT GGCCAAGCCG
GCGCTGGCCG GTTTCTACCG CGAGCTCGAC CCGACCAACA CCTTCAACCC CGGCATCGGC
CATACCTCGT ATCCGCTCCA TAAACCCCAC CTGCCCATAG CCCGCAGATC ATTGGAAGCT
GAACTCCCGT TTTCACCGGA GTTCATCCCA TGA
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| Protein sequence | MTAAVATTVS RDTLLAQMRQ IVGDSHVLID EQATRRFRKG HRTGEGNVLA VVRPGSLLEQ
WRVLQAAVAA DRIVIMQAAN TGLTGGSTPD GDDYDREIVL ISTLRITGVQ LINDGQQVVC
LPGATLDRLE QALAPLNREP HSVIGSSCIG ASVLGGICNN SGGALVRRGP AYTELALYAQ
VKDDGSLELV NHLGIELGDN PEEILTRLQN GDYTPQQVRN EEHAKASDAR YGEHVRDVDA
DTPARFNADP SRLFEASGSA GKLCLFAVRL DTFPKEPSTV FYIGSNDPHD LTEVRRHLLA
ELPRLPIAGE YIHRTAFDIG EKYGKDTFLV IDKFGTARVP AAFAMKSRVD GFFERFGLRG
VTDRVIQALM NLLPSHLPAR MREYRDRFEH HLLVRVSNDT LEQTRAFLTE YFTGSASGAY
FECDADEGRK AFLHRFAIAG AAIRYREAHR SNVEDILALD IALRRNDRDW VETLPQEMEE
QIIHKLYYGH FFCHVFHQDY IVRKGIDPIE MEHRMWKLLD ARRAEYPAEH NVGHLYVAKP
ALAGFYRELD PTNTFNPGIG HTSYPLHKPH LPIARRSLEA ELPFSPEFIP
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