Gene Pmen_1165 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_1165 
Symbol 
ID5108667 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp1311783 
End bp1312130 
Gene Length348 bp 
Protein Length115 aa 
Translation table11 
GC content52% 
IMG OID640502388 
Producthypothetical protein 
Protein accessionYP_001186663 
Protein GI146306198 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.183778 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.18975 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTGC TCAAACGCCT CCTTCCGATC ACTCTTCTGC TGGCTGCTGG CTGCACTTAC 
GCACAGTCCT TTCCAGAGGA CAAGGTCAGG CAGATCGAAC AGAAGAGTGT CGAGATCGCT
CAGAAATATG CCGAGCGCAC CGGCAAGCCA GTGCCTGAAG TTCAAGACTA TAGCTACAGC
ATGAAACTGA ACGTAGCCAA AGTCATTTAT CAGAGCCCGA ACATTGAGTA CTGCGGCGCA
GTACCGATGA TCATGGTATT CGAGTATCCG CTCCATAAAC CCCACCTGCC CATAGCCCGC
AGATCATTGG AAGCTGAACT CCCGTTTTCA CCGGAGTTCA TCCCATGA
 
Protein sequence
MKLLKRLLPI TLLLAAGCTY AQSFPEDKVR QIEQKSVEIA QKYAERTGKP VPEVQDYSYS 
MKLNVAKVIY QSPNIEYCGA VPMIMVFEYP LHKPHLPIAR RSLEAELPFS PEFIP