8 homologs were found in PanDaTox collection
for query gene Pfl01_3374 on replicon NC_007492
Organism: Pseudomonas fluorescens Pf0-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007492  Pfl01_3374  hypothetical protein  100 
 
 
67 aa  129  1.0000000000000001e-29  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.680561  normal 
 
 
-
 
NC_007492  Pfl01_4832  hypothetical protein  49.21 
 
 
135 aa  46.6  0.0001  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.128133  normal  0.25811 
 
 
-
 
NC_010501  PputW619_2853  hypothetical protein  46.38 
 
 
173 aa  45.1  0.0004  Pseudomonas putida W619  Bacteria  normal  0.652841  normal  0.16836 
 
 
-
 
NC_009656  PSPA7_1836  hypothetical protein  44.62 
 
 
104 aa  43.1  0.001  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_21570  hypothetical protein  43.08 
 
 
104 aa  42  0.003  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_1553  hypothetical protein  42.19 
 
 
97 aa  42  0.003  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.320055 
 
 
-
 
NC_010322  PputGB1_2002  hypothetical protein  40.28 
 
 
146 aa  41.2  0.005  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_007954  Sden_2387  hypothetical protein  36 
 
 
120 aa  40  0.01  Shewanella denitrificans OS217  Bacteria  hitchhiker  0.000879292  n/a   
 
 
-
 
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