11 homologs were found in PanDaTox collection
for query gene Pcar_R0010 on replicon NC_007498
Organism: Pelobacter carbinolicus DSM 2380



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007498  Pcar_R0010    100 
 
 		 24 bp  48.1  0.00004  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  1.22312e-19  n/a   
 
 
-
 
NC_009486  Tpet_R0052  SRP RNA; RNA component of signal recognition particle  100 
 
 		 107 bp  44.1  0.0005  Thermotoga petrophila RKU-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_008340  Mlg_R0042  SRP RNA; RNA component of signal recognition particle  95.83 
 
 		 118 bp  40.1  0.009  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.332893  normal  0.55167 
 
 
-
 
NC_008789  Hhal_R0005  SRP RNA  95.83 
 
 		 118 bp  40.1  0.009  Halorhodospira halophila SL1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009135  MmarC5_R0004  SRP RNA; RNA component of signal recognition particle  95.83 
 
 		 307 bp  40.1  0.009  Methanococcus maripaludis C5  Archaea  normal  1  n/a   
 
 
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NC_009634  Mevan_R0013  SRP RNA; RNA component of signal recognition particle  95.83 
 
 		 307 bp  40.1  0.009  Methanococcus vannielii SB  Archaea  normal  1  n/a   
 
 
-
 
NC_009637  MmarC7_R0010  SRP RNA; RNA component of signal recognition particle  95.83 
 
 		 307 bp  40.1  0.009  Methanococcus maripaludis C7  Archaea  normal  1  normal  1 
 
 
-
 
NC_009975  MmarC6_R0040  SRP RNA; RNA component of signal recognition particle  95.83 
 
 		 307 bp  40.1  0.009  Methanococcus maripaludis C6  Archaea  normal  0.0420787  n/a   
 
 
-
 
NC_011206  Lferr_R0056  SRP RNA; RNA component of signal recognition particle  95.83 
 
 		 119 bp  40.1  0.009  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.654574  normal  0.0337609 
 
 
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NC_011761  AFE_1917  Bacterial signal recognition particle RNA  95.83 
 
 		 100 bp  40.1  0.009  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  1  n/a   
 
 
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NC_011761  AFE_1918  sRNA  95.83 
 
 		 105 bp  40.1  0.009  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  1  n/a   
 
 
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