7 homologs were found in PanDaTox collection
for query gene Pcal_1502 on replicon NC_009073
Organism: Pyrobaculum calidifontis JCM 11548



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009073  Pcal_1502  DNA polymerase beta subunit  100 
 
 
214 aa  432  1e-120  Pyrobaculum calidifontis JCM 11548  Archaea  n/a    hitchhiker  0.000371654 
 
 
-
 
NC_009954  Cmaq_1320  DNA polymerase beta subunit  49.15 
 
 
137 aa  120  9.999999999999999e-27  Caldivirga maquilingensis IC-167  Archaea  normal  0.475196  normal  0.327189 
 
 
-
 
NC_009376  Pars_0821  DNA polymerase beta subunit  50 
 
 
140 aa  117  9.999999999999999e-26  Pyrobaculum arsenaticum DSM 13514  Archaea  normal  normal  0.29047 
 
 
-
 
NC_010525  Tneu_0587  DNA polymerase beta subunit  53.93 
 
 
120 aa  101  1e-20  Thermoproteus neutrophilus V24Sta  Archaea  normal  normal  0.838533 
 
 
-
 
NC_009073  Pcal_0463  DNA polymerase beta subunit  41.05 
 
 
127 aa  76.3  0.0000000000003  Pyrobaculum calidifontis JCM 11548  Archaea  n/a    normal 
 
 
-
 
NC_009376  Pars_1089  DNA polymerase beta subunit  39.09 
 
 
127 aa  71.6  0.000000000008  Pyrobaculum arsenaticum DSM 13514  Archaea  normal  normal  0.947057 
 
 
-
 
NC_009440  Msed_1347  DNA polymerase beta subunit  37.17 
 
 
125 aa  62.8  0.000000004  Metallosphaera sedula DSM 5348  Archaea  normal  0.103374  normal 
 
 
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