Gene Msed_1347 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_1347 
Symbol 
ID5103406 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp1320590 
End bp1320967 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content49% 
IMG OID640507236 
ProductDNA polymerase beta subunit 
Protein accessionYP_001191429 
Protein GI146304113 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.103374 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCTAGAGA TATACGCAAG GGAGAGGGAA GAGGTCAGGG AATACGTCTC TTCCCTATGC 
ACAAGGGGAT ACACAGTGAT TCTTTTCGGC TCAAGAGCCC GTGGTGACCA CAAGATCTAC
AGCGACTGGG ACCTTCTTGT TGTGGGAAAA GACAGACCTA CCACTCCACC AGGGCAGATC
GATCTGCACT TCGTTGATGC GGAGTCGGTT GAAAGAGAAA TCCAGGAATT TAACACGGTG
GTGATAGATG CGTTTTATGA GGGAGTGGTT CAGTGCGACA ACCTCTCGAT ATTTACGCGG
TATCGGGAAA TGGTGCTAAG AAGGATCAAT GGGTTGAGGA AGACTAGGGA TGGATGGATA
AGGACTTCTA CTCAGTAA
 
Protein sequence
MLEIYARERE EVREYVSSLC TRGYTVILFG SRARGDHKIY SDWDLLVVGK DRPTTPPGQI 
DLHFVDAESV EREIQEFNTV VIDAFYEGVV QCDNLSIFTR YREMVLRRIN GLRKTRDGWI
RTSTQ