Gene Pcal_0463 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_0463 
Symbol 
ID4910093 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp445142 
End bp445525 
Gene Length384 bp 
Protein Length127 aa 
Translation table11 
GC content54% 
IMG OID640124214 
ProductDNA polymerase beta subunit 
Protein accessionYP_001055361 
Protein GI126459083 
COG category[R] General function prediction only 
COG ID[COG1708] Predicted nucleotidyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCTGT ATAGGCAAAT ATTCCTAAAA GCGGCTCAGG AGGCGGAGGA ATGGATACGA 
CGACTCTGCG AAGCGGGGTA CACAGTCATA CTCTTCGGCT CAAGGGCAAG AGGCGACGCG
AGAATAGACA GCGACTGGGA CCTACTAGTA GTGGGAAAAG ACCCCCCACC CGAGCCGCCC
CACGACCTAG TACAAGTGGT ATTCCTAAAG CCCGAAGACG TAGAACCCCA GATAGAAAAA
TTCAACACCC TGGTAATAGA CGCCCTCTAC GAGGGAAAAC TGATATGCGG CCCCAAAGAC
CTCTACCACA AGTGGAGAGA AACCACACTG AGAAAGACGG CCAACTACGC CAAGACACCA
CAAGGCTGGC TACCACGCTC CTAG
 
Protein sequence
MQLYRQIFLK AAQEAEEWIR RLCEAGYTVI LFGSRARGDA RIDSDWDLLV VGKDPPPEPP 
HDLVQVVFLK PEDVEPQIEK FNTLVIDALY EGKLICGPKD LYHKWRETTL RKTANYAKTP
QGWLPRS