13 homologs were found in PanDaTox collection
for query gene PXO_04630 on replicon NC_010717
Organism: Xanthomonas oryzae pv. oryzae PXO99A



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010717  PXO_04630  hypothetical protein  100 
 
 
46 aa  95.5  2e-19  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_1369  protocatechuate 4,5-dioxygenase subunit alpha  67.39 
 
 
103 aa  71.2  0.000000000005  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_010087  Bmul_6041  protocatechuate 4,5-dioxygenase  51.11 
 
 
434 aa  54.3  0.0000005  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.0923014 
 
 
-
 
NC_012560  Avin_31250  protocatechuate 4,5-dioxygenase  55 
 
 
420 aa  53.1  0.000001  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_2518  protocatechuate 4,5-dioxygenase  55 
 
 
420 aa  52.8  0.000002  Pseudomonas putida KT2440  Bacteria  normal  0.618608  normal 
 
 
-
 
NC_007509  Bcep18194_C7572  protocatechuate 4,5-dioxygenase  48.89 
 
 
434 aa  52  0.000002  Burkholderia sp. 383  Bacteria  normal  0.872573  normal 
 
 
-
 
NC_007974  Rmet_3709  protocatechuate 4,5-dioxygenase  48.89 
 
 
430 aa  52.8  0.000002  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.0482429 
 
 
-
 
NC_009512  Pput_3200  protocatechuate 4,5-dioxygenase  55 
 
 
420 aa  52.8  0.000002  Pseudomonas putida F1  Bacteria  normal  0.0373614  normal  0.0556534 
 
 
-
 
NC_010501  PputW619_2030  protocatechuate 4,5-dioxygenase  55 
 
 
420 aa  52.8  0.000002  Pseudomonas putida W619  Bacteria  normal  0.638746  normal 
 
 
-
 
NC_007963  Csal_0323  protocatechuate 4,5-dioxygenase  50 
 
 
428 aa  50.1  0.00001  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.306263  n/a   
 
 
-
 
NC_009485  BBta_2174  protocatechuate 4,5-dioxygenase  50 
 
 
426 aa  49.3  0.00002  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_010625  Bphy_6377  protocatechuate 4,5-dioxygenase  44.44 
 
 
437 aa  49.3  0.00002  Burkholderia phymatum STM815  Bacteria  decreased coverage  0.00210676  normal 
 
 
-
 
NC_009832  Spro_2096  protocatechuate 4,5-dioxygenase  45 
 
 
420 aa  48.5  0.00003  Serratia proteamaculans 568  Bacteria  normal  normal  0.624399 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>