8 homologs were found in PanDaTox collection
for query gene PSPTO_3936 on replicon NC_004578
Organism: Pseudomonas syringae pv. tomato str. DC3000



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_004578  PSPTO_3936  tail fiber domain protein  100 
 
 		 332 aa  662    Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  1  n/a   
 
 
-
 
NC_004578  PSPTO_2092  tail fiber domain protein  61.86 
 
 		 475 aa  253  4.0000000000000004e-66  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.147761  n/a   
 
 
-
 
NC_004578  PSPTO_4038  tail fiber domain protein  61.86 
 
 		 475 aa  253  4.0000000000000004e-66  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.134914  n/a   
 
 
-
 
NC_007005  Psyr_2770  tail fiber domain-containing protein  41.05 
 
 		 367 aa  185  1.0000000000000001e-45  Pseudomonas syringae pv. syringae B728a  Bacteria  decreased coverage  0.00369502  normal  0.0266249 
 
 
-
 
NC_008463  PA14_08310  hypothetical protein  31.58 
 
 		 350 aa  125  1e-27  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  decreased coverage  0.000000000314349  hitchhiker  0.0000557295 
 
 
-
 
NC_009656  PSPA7_0787  tail fiber protein  58 
 
 		 349 aa  119  6e-26  Pseudomonas aeruginosa PA7  Bacteria  normal  1  n/a   
 
 
-
 
NC_009636  Smed_1639  hypothetical protein  40.85 
 
 		 374 aa  46.6  0.0006  Sinorhizobium medicae WSM419  Bacteria  normal  0.640839  normal  0.175401 
 
 
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NC_009636  Smed_1872  hypothetical protein  69.57 
 
 		 374 aa  43.9  0.004  Sinorhizobium medicae WSM419  Bacteria  normal  1  normal  0.573397 
 
 
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