Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_1872 |
Symbol | |
ID | 5322730 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 1942785 |
End bp | 1943909 |
Gene Length | 1125 bp |
Protein Length | 374 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640790809 |
Product | hypothetical protein |
Protein accession | YP_001327541 |
Protein GI | 150397074 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.573397 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGATAC CCTACGTAAC GGGCACGGTT TCCGTGACCG CCGGCAGCGC CGTTGTCACC GGCTCCGGGA CCGCCTGGCA AACGGCATTG ATCGCAGGTG GGTTGTTCGG GCTCGACAGC AGCAACGGCA ACCCGGTCCC GATCCTCTCC GTCGACAGCA ACACGCAGCT GACGCTGGCG AAGCCATGGC GGGGCACCAC GGCGGCCGGG CAGGGGTACT GGATCGTTCG CGATACGGCC TACCTGCAAC AACAGACCGT CAATGCCCAG GCGCTCTCGA CCTATATCCA GCGGCTCGAC AATGGAACGC TGGCTGCGCT AGCCGGGCTC GACCCCGCGG CGGACAAGTT CGCCTACTTC ACCGGTGCAA ACTCGGGCGC GCTGGCGGAC ATCAAGGCGA AGGGGCGGGA CCTGCTTTCG TCGACGGGTG TGCTCGACGC CCTCCTGAAG CTTGGGCCTG TATGGGGTGG ATCCGTGCGA TCCCCTGCTA ACAGTGATGT CGGATTGGTC GATGGCGACC TCAACACGAT CACCATTGCC GGCGTTTACA CACTCTCGGG GAACTGGGCC AACACCTATG CCGGAGCCGC CTCGGTAGCC ACGACAGGCA CCCTCGTGGT TCTCCAGCGA AGCGCCAATG CCGTCTTTCA ATATTTCTAC CGAGACAACA ACCAGGTCTT CAGAAGGAAC ACCGTCAACG GCGGCACAAG CTGGACGGAC TGGACGATTG TCGAGCTTCC GGTTGTAGGC ACTGCCTCAA ACTCGGCAGG CTTCCCGGCT GGCGCAATCA TCGAGCGCGG CAGCAACGCC AACGGCGAGT ACGTGCGGTT TGCGGACGGC ACACAGATCT GTTGGGGAAC TGGAACCATT AACGTCTCGA CTACCCTCAA CAATCACTTC GGATCCAGCT CTGGAGCCTC GGTCACCGGC AACGCGCTAA TCAGCTTCCC GGCGACGTTC TCGAACACAA ACTACTCGGT AACGGTCTTC CCGACCTTCC GCGGCTTCAC GGTGCTTGGC GCCTATTCGA AGAACGGTGC CAATGCCGCT GTCAGGATGG GTGTATCAGG CTCGACCGCA AACGATGTTC CCTATGAATG GTCAGCTTTC GGAAGGTGGT TCTGA
|
Protein sequence | MTIPYVTGTV SVTAGSAVVT GSGTAWQTAL IAGGLFGLDS SNGNPVPILS VDSNTQLTLA KPWRGTTAAG QGYWIVRDTA YLQQQTVNAQ ALSTYIQRLD NGTLAALAGL DPAADKFAYF TGANSGALAD IKAKGRDLLS STGVLDALLK LGPVWGGSVR SPANSDVGLV DGDLNTITIA GVYTLSGNWA NTYAGAASVA TTGTLVVLQR SANAVFQYFY RDNNQVFRRN TVNGGTSWTD WTIVELPVVG TASNSAGFPA GAIIERGSNA NGEYVRFADG TQICWGTGTI NVSTTLNNHF GSSSGASVTG NALISFPATF SNTNYSVTVF PTFRGFTVLG AYSKNGANAA VRMGVSGSTA NDVPYEWSAF GRWF
|
| |