Gene Psyr_2770 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2770 
Symbol 
ID3368288 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp3354775 
End bp3355878 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content56% 
IMG OID637653119 
Producttail fiber domain-containing protein 
Protein accessionYP_235847 
Protein GI66046006 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00369502 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0266249 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTTGGT ACAAGTCGGG TACGGTTTCC GTCACCCAAA ATTCGAATGC GGTCATTGGC 
ACCAATACCG CCTTCATCGC GAACAGCCGG GTAGGTGATG GCTTTCGCGG GCCTGATGGT
GGCTGGTATG AGGTGACCAA CATCGCCAGC AATACCGCGA TGTCGATCGC GCCGAACTAT
CAGGGAGTCA CCAACAACGC GGGCGGGTAC GCGCTTGCTC CGATGCAGGG CTACGTCAAG
GATTCTGCTG ATGCGCTCCG GGCGCTGGTC AATCAGTTCG GCTCTACCCT TGCGGTGTTG
GGCACTTCTG GTACGCGCGA AGGTGTGCGC GCAGCACTTG CTGCTGCCGC CGCCGGGAAC
AACAGCGACA TCCTCTCCCT GTCGGGTCTG ACAACGGCGC TGACGATTGA GCAGGGTGGG
ACCGGCAAGA AGAGTGCTGG CGAAGCCATC CAGGCATTGG GCGGTGTGCG CTTGGGGGCG
GCTAATTCTT CCGTTGGGAC AAGTCTTTTT TCGGGAGCTC CGCCCGGCAT AGCCTCAATA
GGCCCCACTA ACAATAACGG TAACACGGCG CTACGAATAG GTAATGGCAA CAACAATAGC
GCATCCGCGG TAATGACATT TATTCGAGAT GGGGCGTTTG GTCTTCACCT TGGAGTTGAC
ACCGACAACA AATTCAAGAT CGGTGGGTTT TCAATGGGTG AAGTAGCACG GACCTTATAC
CACGAGGGTA ACGCAGTAGG GACCGTTTCA CAGTCGGGAG GCATGCCCAC CGGGGCGATA
ATAGAAACTG GAAATTTGAA TGGGGGCACG TTCACGAAGT ATTTGGACGG CACGATGATT
TGCCGAGGGA TATCGCCAGC CCCAGTGGCG GCTAGCCAGG GCGGTGGACC GATCTTCTAC
TCAGGCGGCG TTTCTTTCGT ATTTCCTGCG CCATTTGCTG CTGTTCCGGC AGTGACGATG
CAGGCCATGA CTTCTAATGG TTACTTTTGT TGGGGGGCAT CCGATGGTAG TGCCACTACT
ACGGGCATCA TCGGTCGAGT TGTTTCCCCG TCGAGTACCG CTTCTTCGTA CCTTTGTTAT
ATAGCCGTTG GCAGGTGGTT CTAA
 
Protein sequence
MPWYKSGTVS VTQNSNAVIG TNTAFIANSR VGDGFRGPDG GWYEVTNIAS NTAMSIAPNY 
QGVTNNAGGY ALAPMQGYVK DSADALRALV NQFGSTLAVL GTSGTREGVR AALAAAAAGN
NSDILSLSGL TTALTIEQGG TGKKSAGEAI QALGGVRLGA ANSSVGTSLF SGAPPGIASI
GPTNNNGNTA LRIGNGNNNS ASAVMTFIRD GAFGLHLGVD TDNKFKIGGF SMGEVARTLY
HEGNAVGTVS QSGGMPTGAI IETGNLNGGT FTKYLDGTMI CRGISPAPVA ASQGGGPIFY
SGGVSFVFPA PFAAVPAVTM QAMTSNGYFC WGASDGSATT TGIIGRVVSP SSTASSYLCY
IAVGRWF