Gene Smed_1639 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1639 
Symbol 
ID5322497 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1731007 
End bp1732131 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content62% 
IMG OID640790579 
Producthypothetical protein 
Protein accessionYP_001327311 
Protein GI150396844 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.640839 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.175401 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATAC CCTATGTAAC CGGCACGGTT TCCGTGACCG CCGGCAGCGC CGTTGTCACC 
GGCTCCGGGA CCGCTTGGGC CACCGCACTG ATCGCCGGCG GGTTCTTCGG CCTCGACAGC
AGCAACGGCA ACCCGGTCCC GATCCTCTCC GTCGACAGCA ACACGCAACT GACGCTGGCC
AAGCCCTGGC GCGGCACCAC GGCGGCCGGG CAGGGATACT GGATCATCCG CGATACGGCC
TACCTGCAGC AGCAGACCGT CAACGCCCAG GCGCTCTCGA CCTATATCCA GCGGCTCGAC
AATGCGGCGC TCACGGCGCT GGCCGGGCTC GACCCCGCGG CGGACAAGTT CGCCTACTTC
ACCGGTGCAA ACTCGGGCGC GCTGGCGGAC ATCAAGGCAA AGGGGCGAGA CCTGCTTTCG
TCGACGGGTG TGCTCGACGC ACTCCTGAAG CTCGGGCCGG TATGGGGTGG ATCCGTTCGA
TCCCCTGCTA ACAGTGATGT CGGATTGGTC GATGGCGACC TCAACACGAT CACCGTTGCC
GGCGTTTACA CACTCTCGGG GAACTGGGCC AACACCTATG CCGGAGCTGC CTCGGTAGCC
ACGACAGGCA CGCTCGTGGT TCTCCAGCGA AGCGCCAATG CCGTGTTTCA ATATTTCTAC
CGAGACAACA ACCAGGTCTT CAGAAGGAAC ACCGTCAACG GCGGCACAAG CTGGACGGAC
TGGACGATTG TTGAGCTACC GGTTGTAGGC ACTGCCTCAA ACTCGGCAGG CTTCCCGGCT
GGCGCAATCA TTGAGCGCGG CAGCAACGCC AACGGCGAGT ACGTGCGTTT TGCTGACGGC
ACACAGATCT GTTGGGGGAC GGGAACGACT AACGTTTCGA CCAACCTCAA CAACCACTTC
GGATCTACCT CTGGAGCCTC GGTCACCGGC AACGCTTTGA TCAGCTTCCC GGCGACGTTC
TCGAACACAA ACTACTCGGT ATCGGTCTTC CCGACCTTCC GCGGCTTCAC GGTGCTTGGC
GCCTATTCAA AGAACGGTGC CAATGCCGCT GTCAGGATGG GCGTGTCAGG CTCGACCGCA
AACGATGTTC CTTATGAATG GTCAGCTTAC GGAAGGTGGT TCTGA
 
Protein sequence
MTIPYVTGTV SVTAGSAVVT GSGTAWATAL IAGGFFGLDS SNGNPVPILS VDSNTQLTLA 
KPWRGTTAAG QGYWIIRDTA YLQQQTVNAQ ALSTYIQRLD NAALTALAGL DPAADKFAYF
TGANSGALAD IKAKGRDLLS STGVLDALLK LGPVWGGSVR SPANSDVGLV DGDLNTITVA
GVYTLSGNWA NTYAGAASVA TTGTLVVLQR SANAVFQYFY RDNNQVFRRN TVNGGTSWTD
WTIVELPVVG TASNSAGFPA GAIIERGSNA NGEYVRFADG TQICWGTGTT NVSTNLNNHF
GSTSGASVTG NALISFPATF SNTNYSVSVF PTFRGFTVLG AYSKNGANAA VRMGVSGSTA
NDVPYEWSAY GRWF