11 homologs were found in PanDaTox collection
for query gene PICST_34164 on replicon NC_009068
Organism: Scheffersomyces stipitis CBS 6054



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009068  PICST_34164  Exosome complex exonuclease RRP40 (Ribosomal RNA processing protein 40)  100 
 
 		 260 aa  527  1e-149  Scheffersomyces stipitis CBS 6054  Eukaryota  normal  1  normal  0.442314 
 
 
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NC_006686  CND02660  conserved hypothetical protein  36.95 
 
 		 247 aa  147  1.0000000000000001e-34  Cryptococcus neoformans var. neoformans JEC21  Eukaryota  normal  1  n/a   
 
 
-
 
BN001303  ANIA_04617  exosome complex exonuclease Rrp40, putative (AFU_orthologue; AFUA_2G02340)  34.92 
 
 		 273 aa  100  3e-20  Aspergillus nidulans FGSC A4  Eukaryota  normal  1  normal  0.470117 
 
 
-
 
NC_011677  PHATRDRAFT_12921  predicted protein  32.99 
 
 		 240 aa  92.8  5e-18  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  1  n/a   
 
 
-
 
NC_009073  Pcal_0934  exosome complex RNA-binding protein Rrp4  27.23 
 
 		 235 aa  50.8  0.00002  Pyrobaculum calidifontis JCM 11548  Archaea  n/a    normal  1 
 
 
-
 
NC_009376  Pars_1936  exosome complex RNA-binding protein Rrp4  25.49 
 
 		 232 aa  50.8  0.00002  Pyrobaculum arsenaticum DSM 13514  Archaea  normal  1  normal  1 
 
 
-
 
NC_008553  Mthe_1363  exosome complex RNA-binding protein Rrp4  25 
 
 		 221 aa  48.9  0.00007  Methanosaeta thermophila PT  Archaea  normal  0.438885  n/a   
 
 
-
 
NC_008701  Pisl_0837  exosome complex RNA-binding protein Rrp4  25.74 
 
 		 231 aa  48.9  0.00008  Pyrobaculum islandicum DSM 4184  Archaea  normal  0.628304  normal  0.123763 
 
 
-
 
BN001306  ANIA_10406  exosome complex exonuclease Rrp4, putative (AFU_orthologue; AFUA_3G05860)  31.03 
 
 		 390 aa  46.2  0.0005  Aspergillus nidulans FGSC A4  Eukaryota  normal  0.674842  normal  0.0792702 
 
 
-
 
NC_009359  OSTLU_38656  predicted protein  22.55 
 
 		 342 aa  45.4  0.001  Ostreococcus lucimarinus CCE9901  Eukaryota  normal  1  normal  1 
 
 
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NC_010525  Tneu_1382  exosome complex RNA-binding protein Rrp4  23.33 
 
 		 238 aa  42.7  0.005  Thermoproteus neutrophilus V24Sta  Archaea  normal  1  normal  1 
 
 
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