| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pisl_0837 |
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| Symbol | |
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| ID | 4616527 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum islandicum DSM 4184 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008701 |
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| Strand | - |
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| Start bp | 750298 |
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| End bp | 750993 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 639783933 |
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| Product | exosome complex RNA-binding protein Rrp4 |
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| Protein accession | YP_930356 |
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| Protein GI | 119872349 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1097] RNA-binding protein Rrp4 and related proteins (contain S1 domain and KH domain) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.628304 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 0.123763 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCATCTCG TAGTTCCCCG CCAGTTAGTA TTTCCGGGCG ATGTTGTAGC CACTGCAGAG
AGTAGAGTAG AAGGGCCGGT GTACTTAGAC AACGGCAAAT ATAGAAGCCT TGTTGTAGGT
CTTGTGGAAT TTAGAGAGGA TGTTGTGGTC ATAGTTCCAT TAGAGGGCAC ATATAGGCCT
AAAAAAGGAG ATTTAGTCGT GGGGTATGTC ACAGATGTGT TAGCTACAGG TTGGGAGGTC
GATGTGAGGT CATTTATGCC GGCATATCTC CCTGTTAGCG AGGCGTTGCA TAAACATGTC
GACTTAGAGA CCACGCCGCT CACAACTTTT CTCAATATCG GAGATGTAAT AGTAGCAAAA
GTTAAGGATG TGGATTTAAC AGATGAATAC CCTATCATAC TTACCTTGAA AGAGGAGAAA
GTGGGAAAGG TAGAGCGTGG AACGGTTATA GAGATATCCC CTGTGAAAGT TCCCCGTGTA
ATTGGGAAAA AAGGAAGCAT GTTAAACACA TTAATGGAGT TGGGTTGTGA CATCATCGTA
GGTCAAAACG GCAGGATTTG GATTAGGTGT AGAGATGTAA AAGACGAGGT ATTTCTAGCC
AGCCTAGTTA AGAAGATAGA GGCCGAGAGC CATGTGATGG GGCTCACAGA TAGAATAAAA
ACAGAGATAG AGAAGTGGAA GACGGGCAAG ACCTAG
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| Protein sequence | MHLVVPRQLV FPGDVVATAE SRVEGPVYLD NGKYRSLVVG LVEFREDVVV IVPLEGTYRP
KKGDLVVGYV TDVLATGWEV DVRSFMPAYL PVSEALHKHV DLETTPLTTF LNIGDVIVAK
VKDVDLTDEY PIILTLKEEK VGKVERGTVI EISPVKVPRV IGKKGSMLNT LMELGCDIIV
GQNGRIWIRC RDVKDEVFLA SLVKKIEAES HVMGLTDRIK TEIEKWKTGK T
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