12 homologs were found in PanDaTox collection
for query gene PHATRDRAFT_38130 on replicon NC_011683
Organism: Phaeodactylum tricornutum CCAP 1055/1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011683  PHATRDRAFT_38130  predicted protein  100 
 
 
199 aa  395  1e-109  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  0.170691  n/a   
 
 
-
 
NC_006685  CNC00960  late endosome to vacuole transport-related protein, putative  38.1 
 
 
220 aa  103  2e-21  Cryptococcus neoformans var. neoformans JEC21  Eukaryota  normal  0.429052  n/a   
 
 
-
 
NC_009370  OSTLU_28171  predicted protein  33.33 
 
 
205 aa  82.4  0.000000000000004  Ostreococcus lucimarinus CCE9901  Eukaryota  normal  normal  0.0116075 
 
 
-
 
NC_009046  PICST_32690  Vacuolar sorting protein SNF7 (Vacuolar protein sorting-associated protein VPS32)  36.11 
 
 
222 aa  81.3  0.000000000000009  Scheffersomyces stipitis CBS 6054  Eukaryota  decreased coverage  0.00479925  normal  0.0750139 
 
 
-
 
BN001302  ANIA_04240  Vacuolar-sorting protein snf7 (Vacuolar protein-sorting-associated protein 32) [Source:UniProtKB/Swiss-Prot;Acc:Q5B5E0]  30.77 
 
 
242 aa  60.8  0.00000001  Aspergillus nidulans FGSC A4  Eukaryota  normal  normal  0.774284 
 
 
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NC_006691  CNF02590  HSPC177, putative  31.01 
 
 
215 aa  54.3  0.000001  Cryptococcus neoformans var. neoformans JEC21  Eukaryota  normal  n/a   
 
 
-
 
NC_011686  PHATRDRAFT_48646  predicted protein  27.08 
 
 
516 aa  53.9  0.000002  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  0.555867  n/a   
 
 
-
 
BN001304  ANIA_07310  vacuolar sorting protein SNF7 family protein, putative (AFU_orthologue; AFUA_2G16692)  28.99 
 
 
473 aa  48.9  0.00004  Aspergillus nidulans FGSC A4  Eukaryota  normal  0.161745  normal 
 
 
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NC_009358  OSTLU_87009  predicted protein  25.48 
 
 
226 aa  46.2  0.0003  Ostreococcus lucimarinus CCE9901  Eukaryota  hitchhiker  0.00688126  n/a   
 
 
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NC_011671  PHATR_18620  predicted protein  32.93 
 
 
222 aa  45.1  0.0007  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  n/a   
 
 
-
 
NC_007794  Saro_0813  O-acetylhomoserine aminocarboxypropyltransferase  30.19 
 
 
427 aa  43.1  0.003  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.657218  n/a   
 
 
-
 
BN001305  ANIA_05632  SNF7 family protein (Cta1), putative (AFU_orthologue; AFUA_4G11000)  32.73 
 
 
216 aa  42.4  0.005  Aspergillus nidulans FGSC A4  Eukaryota  normal  normal  0.457618 
 
 
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