Gene PHATRDRAFT_38130 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_38130 
Symbol 
ID7202965 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011683 
Strand
Start bp146221 
End bp147166 
Gene Length946 bp 
Protein Length199 aa 
Translation table 
GC content47% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002182334 
Protein GI219124068 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.170691 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTGGT TTGGCAAGAA AAAGACCGAG CCTTCTACCG TGTCGGCGAC GTCGGCGGCC 
CGGCCGGAAG ACCCCCAAAA GACCATTGTG AAACTACGTG AATCGATCGC CAATCAGGAG
AAACGGTAAG TTCTAGCTCG CGTATTGTCT CTGTATTCTG AGCGCGGTCA ATAGGGAATT
CTCTCGCGGA ACAGTACATT GTTGGACCAA CGATTACGAT TACAATTACT CTCTACGAAA
GTGCGGACGA TCTTGGACGA CTGGATTGAA CAATTCGTTC CTGGGCGACA GCTTTTGGAA
CGAAAGAGTG CCACCACTAA TCTTCAACCT TTTTTGTTTA ATAGGGAAGA GCACATTAGC
CGCAAAGTGG ATTCAATGAT TAAGGAGGCC AAGGAGAAAA TGGCTAAAGG AGATAAAAAA
GGTAAGAGAT CATAAACAAG AAAGACGAAA TTCCTAGACA AAGGCAGTCG ACACACCACT
GCTACTGCCT TGCTCACCTT CTGTACGATT GACCGTCAGG AGCACTGTTT GCCATGAAAC
GCAAAAAACT ATACGAGTCG GAAGTGGACA AGATTCAGAA CGTGAAGATG ACTTTGGAAA
CACAGGTTAT CAATCTCGAA TCCGCCGCGC AAAACGCGGA AACCTTCAAA GCCATGGAAG
CGGGTAGTAA GACCATGAAG AAGATACGAA CAGACGTCGG CATTGAAAAG GTGGACGATA
TAATGGATGA CATCAAGGCC GAAATGGAAA TGGCGAACGA GATCAACGAA GCGATTGCAC
AACCGGTGGA TCCACTGCTA ACGGACGAGG ACGAATTGTT GGAAGAATTG AACGCGTTAG
AAGCAATGGA TCTGGAAGCC GAATTGCTGG CTCCGCCATC GTCTTCCAAA ATGTCAGGAT
TTTCTTTACC TACAGTTCCA GACGCAAAAT TACCAGTATT GGCTAG
 
Protein sequence
MNWFGKKKTE PSTVSATSAA RPEDPQKTIV KLRESIANQE KREEHISRKV DSMIKEAKEK 
MAKGDKKGAL FAMKRKKLYE SEVDKIQNVK MTLETQVINL ESAAQNAETF KAMEAGSKTM
KKIRTDVGIE KVDDIMDDIK AEMEMANEIN EAIAQPVDPL LTDEDELLEE LNALEAMDLE
AELLAPPSSS KIRKITSIG