9 homologs were found in PanDaTox collection
for query gene CNC00960 on replicon NC_006685
Organism: Cryptococcus neoformans var. neoformans JEC21



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_006685  CNC00960  late endosome to vacuole transport-related protein, putative  100 
 
 
220 aa  440  9.999999999999999e-123  Cryptococcus neoformans var. neoformans JEC21  Eukaryota  normal  0.429052  n/a   
 
 
-
 
NC_009046  PICST_32690  Vacuolar sorting protein SNF7 (Vacuolar protein sorting-associated protein VPS32)  40.36 
 
 
222 aa  111  7.000000000000001e-24  Scheffersomyces stipitis CBS 6054  Eukaryota  decreased coverage  0.00479925  normal  0.0750139 
 
 
-
 
BN001302  ANIA_04240  Vacuolar-sorting protein snf7 (Vacuolar protein-sorting-associated protein 32) [Source:UniProtKB/Swiss-Prot;Acc:Q5B5E0]  42.05 
 
 
242 aa  110  1.0000000000000001e-23  Aspergillus nidulans FGSC A4  Eukaryota  normal  normal  0.774284 
 
 
-
 
NC_011683  PHATRDRAFT_38130  predicted protein  38.61 
 
 
199 aa  101  1e-20  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  0.170691  n/a   
 
 
-
 
NC_009370  OSTLU_28171  predicted protein  38.35 
 
 
205 aa  98.6  7e-20  Ostreococcus lucimarinus CCE9901  Eukaryota  normal  normal  0.0116075 
 
 
-
 
NC_006694  CNI02380  expressed protein  30.72 
 
 
518 aa  49.7  0.00003  Cryptococcus neoformans var. neoformans JEC21  Eukaryota  normal  0.34129  n/a   
 
 
-
 
NC_006691  CNF02590  HSPC177, putative  23.66 
 
 
215 aa  47.4  0.0002  Cryptococcus neoformans var. neoformans JEC21  Eukaryota  normal  n/a   
 
 
-
 
BN001304  ANIA_07310  vacuolar sorting protein SNF7 family protein, putative (AFU_orthologue; AFUA_2G16692)  35.82 
 
 
473 aa  46.6  0.0003  Aspergillus nidulans FGSC A4  Eukaryota  normal  0.161745  normal 
 
 
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NC_009358  OSTLU_87009  predicted protein  31.77 
 
 
226 aa  42  0.008  Ostreococcus lucimarinus CCE9901  Eukaryota  hitchhiker  0.00688126  n/a   
 
 
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