Gene CNC00960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNC00960 
Symbol 
ID3256554 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006685 
Strand- 
Start bp286488 
End bp287785 
Gene Length1298 bp 
Protein Length220 aa 
Translation table 
GC content47% 
IMG OID638255315 
Productlate endosome to vacuole transport-related protein, putative 
Protein accessionXP_569412 
Protein GI58264512 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.429052 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ACACACTCTA CAATTCCCGA ATCATATACA TATTGTTTCA ATCACAATGT CAGGGTGGAT 
GTCCTACTTC ACAGGTCGCA AAGACACTCG AGAATCAGCT CGAGATGCCA TTGTCGGCCT 
GCGCCAACAA TTATTGATGC TCGAAAAGAA GGAAGAGTTT TTGCAGAAGA AGATTGAAGA 
GGAGATGAAG AAAGCGAAGG CTAATGCTAC CGGCAACAAG AGATGTGAGT TGTGTTTGAT 
CAATTTGAGC GACATCGCTC GGTTTGAGGA TTCGGCCAGC AGGAGCGAGC GGAATATGGA 
CAATGAGAAC GCGAGGCGAA AGCGATTAAT TGTGATTTGG AAGACAAGCG TTGAATAGGG 
GCAGGGAATA TGAAGACCTT AAGCTTTAGT TGCTGACGTT GTCTTTCTTC AGTGGCTATG 
GCGGCTCTTA GACAGAAGAA GGCACACGAG AACGAACTTG ATAGGATCGC CGGCACAAGA 
TTGACACTTG AGACTCAGGT GAGTGAAGAT TAATTTCTAT ACGATGGATC CAATGTGACA 
TTTATTCTCT CTTGACAGGT GAACGCTATA GAATCAGCGA ACTTGAATGC GGAGACAATG 
GTGGCAATGA AGAAGGGTGC GGATGCTCTC AAGGGTATCC ACAGCAATCT GTGCGTCTGT 
CTGGGACCAA TCAATGACTG TAAGGCGGAA TGCTTATGTT CATTACAGTA CGGCCGAGGG 
TGTCGATGCT ACAATGGACA AAATCAGGGA GCAAATGGAC CTTACCAACG ACATTTCCGA 
TGCCATTTCC AACCCCGTGG GCATGGGTAT TGTTCTTGAC GAGGTAAGAC AGGTGTATGC 
GTTTTTTGAG TTTCTGCTTA CTTTACACGT ATCAGGATGA TCTTAAAGAA GAATTGGAGG 
CTCTCGAACA AGAACAGCTT GATGACCGGC TTGCAGGGGC AGACCGTGTC CCAAGTCACC 
TTCCTGCGTC ACCCGTCGGG CAAACGACAG GACGTAAGTC CTTCATTGTT CATCCGTTAG 
TTTGGGAGTC GCTGACAGTT ATAACTTTGT AGGAGCCGCA GTGGAAGAAG ATGAGGATGA 
CGAAGAAGCC CAGCTTCGTA AACTCCAGGC TGAGCTTGCC ATGTAACATC TCGTCTTCTA 
TACGGACCAT AGTCACTCCC TCCACATCAG ACCTCACGGC GCTTCTTGCA CCCATGCCGC 
AGTATCCGTC TTTCCATCTT TTACGATGTT GTTTCCTTCC TGGTTTGAGT GATCTTCTGG 
CTCTTCCATA TAGAGCATGT AATAATATAT CACGATTT
 
Protein sequence
MSGWMSYFTG RKDTRESARD AIVGLRQQLL MLEKKEEFLQ KKIEEEMKKA KANATGNKRL 
AMAALRQKKA HENELDRIAG TRLTLETQVN AIESANLNAE TMVAMKKGAD ALKGIHSNLT 
AEGVDATMDK IREQMDLTND ISDAISNPVG MGIVLDEDDL KEELEALEQE QLDDRLAGAD 
RVPSHLPASP VGQTTGRAAV EEDEDDEEAQ LRKLQAELAM