6 homologs were found in PanDaTox collection
for query gene Msil_0610 on replicon NC_011666
Organism: Methylocella silvestris BL2



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011666  Msil_0610  hypothetical protein  100 
 
 
83 aa  166  8e-41  Methylocella silvestris BL2  Bacteria  n/a    hitchhiker  0.0057785 
 
 
-
 
NC_010322  PputGB1_1578  CsbD family protein  34.15 
 
 
82 aa  51.2  0.000005  Pseudomonas putida GB-1  Bacteria  normal  0.0515828  normal  0.510488 
 
 
-
 
NC_010676  Bphyt_5643  CsbD family protein  33.77 
 
 
80 aa  48.9  0.00002  Burkholderia phytofirmans PsJN  Bacteria  normal  0.595165  normal 
 
 
-
 
NC_002947  PP_2059  CsbD family protein  30.49 
 
 
82 aa  45.4  0.0003  Pseudomonas putida KT2440  Bacteria  normal  0.918021  normal 
 
 
-
 
NC_009512  Pput_3681  CsbD family protein  29.27 
 
 
82 aa  44.7  0.0005  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_2159  hypothetical protein  30.49 
 
 
82 aa  43.5  0.001  Pseudomonas putida W619  Bacteria  normal  normal  0.876474 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>