10 homologs were found in PanDaTox collection
for query gene Mpe_B0376 on replicon NC_008826
Organism: Methylibium petroleiphilum PM1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008826  Mpe_B0376  hypothetical protein  100 
 
 
1172 aa  2347    Methylibium petroleiphilum PM1  Bacteria  normal  0.276415  normal 
 
 
-
 
NC_009140  SNSL254_pSN254_0189  type IV conjugative transfer system protein TraG  25.29 
 
 
1204 aa  130  1.0000000000000001e-28  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  hitchhiker  0.0000111366 
 
 
-
 
NC_011761  AFE_1068  pilus assembly protein TraG, putative  24.64 
 
 
1218 aa  123  1.9999999999999998e-26  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
NC_011083  SeHA_C1594  sex pilus assembly  24.27 
 
 
1145 aa  112  5e-23  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
-
 
NC_008545  Bcen2424_6815  TraG domain-containing protein  22.2 
 
 
1313 aa  68.9  0.0000000005  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_009999  Sbal195_4618  TraG domain-containing protein  24.15 
 
 
939 aa  49.3  0.0004  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_010070  Bmul_6220  hypothetical protein  22.14 
 
 
1140 aa  48.1  0.001  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.220968  normal 
 
 
-
 
NC_009661  Shew185_4432  TraG domain-containing protein  23.7 
 
 
936 aa  46.2  0.003  Shewanella baltica OS185  Bacteria  normal  normal 
 
 
-
 
NC_009998  Sbal195_4526  TraG domain-containing protein  23.46 
 
 
937 aa  45.4  0.006  Shewanella baltica OS195  Bacteria  normal  normal  0.769424 
 
 
-
 
NC_011664  Sbal223_4388  TraG domain protein  23.46 
 
 
937 aa  45.4  0.006  Shewanella baltica OS223  Bacteria  normal  normal  0.812374 
 
 
-
 
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