| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_6815 |
|---|
| Symbol | |
|---|
| ID | 4454872 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008545 |
|---|
| Strand | + |
|---|
| Start bp | 23644 |
|---|
| End bp | 27585 |
|---|
| Gene Length | 3942 bp |
|---|
| Protein Length | 1313 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 639698877 |
|---|
| Product | TraG domain-containing protein |
|---|
| Protein accession | YP_840437 |
|---|
| Protein GI | 116687191 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACATGG AAATCGACAC CTATGGGAAC GTCGATACTT TGTACTTCGT CATGCAGGGT
ATCGCGTCTT TCATGGGTAG CGGCACCTGG ACAGGTCTCA TCCGCTACAC GCTGTTGTGC
GGGGTGGTGA TCTGGACGAT TGTCGCGATC GGTCGGAAAG GCTACGAGAT CTTCCGCTGG
TTCGCCGCCG CGATGCTGAT GACGCAGCTG CTGTTGCTGC CTATTGAGAA CGTGTTCATC
ACCGACGTCA ACAACGTGCA GCCGACTCGG GAGGTGGATC ACGTCCCCGC GTATCTCGCC
GCCGTTGCCC AGAGCTTCAC GCTCATCTCT CACGTGCTGA CGCAGTCGTA CGAAACGATC
TTTTCGGTGC CGGATACGCT GACCCTGAAA AAGGGCGATG TGGGTTTCGG CATCTCCGTG
CTGCAGAAGG TGAACAAGGC TGAAATCACT GATCCGGGGC TGCACGCCGA CCTTATTCAG
TTCTTCAAGG AGTGCACGGT CTACGATATC CAGGACGGCG CAATTGATCC GAAGACGATC
ATGAACGGCA CGGACCCCTT CAATACCGTG TTCACGTCGA CGAGCCCTGC ACGATACGTG
ACGACGAACA CCCTTACCGC GAACCCTACG ACGGACACGT GTTCCGCGAC CGGCACTTTG
TTGCTGCTGC GCGTACAGGA CGCTGAGCAA GCGGCCGAGC AGATGTATGG CAGCGAGATG
TATCCGGAGA TCGCCGACCC CTCCATGGCG AAGGCGGAGT TCGTCAACGC GATCGGAGAT
TCGTACGGCT TCATCCTCCA GTCGTCGCAG AACGCGTCCT CGGCGCTACG ACAGGCAATG
TTCAACAACG TATGGCGTCA GGCGGGCGCG GAGCTGCCCG CGATGCTGAA CGATCCGGCG
CGCGTGGCAG AGGTCAATGC GTTGATGAGT TCGGCCCAGG CTGCGGTGGC GACGAACGGT
TCGCTTGCCT CCATGGCGAT TCTGGCCAAG AACACGCTGC CGACTGTTCG CAACTATGCC
GAAGCGATTA TCTATGCGGT TTTCCCGCTC ATTCTGGTGC TCTGCTTGAT TAGCGGCGCG
GATGGGGCCA AGCGAATCCT CGCGATGTAC GCGAAGACGG TGGCGTGGGT ATCTATCTGG
CCGATGCTCT TCGCGGTCAT CAACGGGCTG TCGCTGATCC ACCTGAGCCA TGAGATGCGC
TCGATGTCGC TGCAGGCCGG CGTGCCGTTC GGGATGGCGG CGAAGTTCGG GCAGACGTTG
CTCGACGAGC AGGCGCTGCT TGGATACATG GTGATTATTA CGCCACCCCT TGCGTGGATG
TTGCTGAATT TCGCGTCGGC CGGCGTTGTC GGTGCGTTTT CTCAACTGAG CGGCGCGCTG
ACCGGCTCTG CTCAACAGAT CGGCGGCCAG CAGGCTCAGG GCGACGAAAA CATCGGCAAC
GTGCACATGG ATTCGTCGTC GATCGATAAC GCGTCGCGCA ACGTGACCTC GGCGAACAAG
TACGACAACA CTGTGCAGTC GCGCACCGGG TCGATGAACG TCGATACCGG GACCGGCTCG
GCCTTCACGA ACTTTGCAAA TGGCCTGATC GCTCGCACCG AGTTTCAGAA CAGCCTCGGC
GTTTCGGCAA CCTCCCAGGA TGCGTTCGAG CGGTCGCTCG GCACCGACAC CTCGACGGGT
GTCGCGGCAA ACCGAACGAA TTCCACGTTC GCTGGGCGGG AGCAGCTTGC GTCCAGCACG
AACAGCGTCT CGAGCAGCCA GGAGCGTGGA AGCTCACAGC GCCTGTCCGA CGATTCCAGC
TCGGGTACGC GGGCCTCGTC TAGCCAAACA GGTGAGCGGC GGACCGCACA TGATCAGCAA
TATGCGATAG ATCAGTCACA CTCCGTCGAC GGTACAACTT CTGCAGGAGC CAAAGGTTCG
ATCATGCTTG GTGGCGGCTT TGCCAAGTCG TTTGGCGAGG ATGGGGCGCC ATCCGGCAAC
GCCGGCGGTG GAGGCGGCGG CTCAGCCGGT GGTAGCGGGC GTGGGCCTTC CGGCAATGGT
CGGCAAGGAA GTAGCAATCC GGTCTCGAAC TCGCCTCTTT TTAACCAAGC AGAAGAAGAC
AAACTCGCTC GCAAGGCCGA GTCACTTGGA AAATCGCCGA ACGAAGTTCA AGCGATTCGG
GATGCGTATC GATCGAAGGT GCGGGCTGCG GATTATGCAA ATGGCGGCGG CACGGGGAAA
GGGCAGTCGA GTCTGAAGTT TGGTCTCGAT GTTTCGGGCG AAGGCGGATA TACGAAGTCT
TGGCGGAATT CTGACGCACA AAAATTCGTC GATCAAAACA GTAGTTTGGC CGCCTACACC
GAGAGCGATA ACGTCTCTCA CGAAGGCTCG CAGATGCACA ACGACTCCAC CGGAATGGAG
TCCGGGCAGC ACGTTCGCAG CGACCGGTCG GCGTCTCTGA CGGACCAGGT TTCGTCCGGC
TCCCGCGTTG CAGCGGATCT CACTCGCAGC GCAGACGTGC GCCAGCGCGG ATCGACGCAA
GTGGTTTCGC GCGTAGATAC CTCGACCAAC CTGATGACGC CTGAGAACCT GCAGGCGGTC
GCTGCGCGCA ACGGTATGCG ATACAGCCAG CTGATGACGT TGCCGTCCCC GCAGATCGCT
CAGCTGGTCG CCCAAGATGC AGCGATGCGC GACATCGTTT CGCGCAACTC GACGTTGCCG
ACCACGGCTC GTGATGGGTC TACTCTCCCT GCGAGCGGCA TCGACGTCGT TCGCCAGGAC
CAACGCAACC AGTCCGGCGT TGGTGCAAGT GCCCCCGCGT CGTTCCGGCG ATTTGCAGGT
GCGGTTGGAC CAGTGGATAC GACACCCCTG GATGTTGCGA CGCCGATGCC CCAAATCGTG
ACCGCCGCAC AGCACCGTGT GGATGTTACG CAGCAACGGG TCGCAAGCGA GTCCGCCGCG
CCGATCAAGC AGGTGCGTGA CCACGTCGAT CCGTCGGCCG ACAACAAGCC GCTCATGACG
CCCGAGCGGG CGCCGGGCCG CTCGCTTTCC TCTCCGCCCG TGGCGCCGTC AGCTTCCGAT
AGCAAGGGGC CCCTGTCGGC ATGGGTGAAC TCGATTCAGC CGAGCGGGCC GGCTGGAACA
ACGTCCACCT CGGCACCAAT TGAAAACTTC CTACGTCCGC GAACTACGGG AAATGGCCCG
ACTCTTGAAG CCGCTCGAGC GGCGGAAACC GGCACGGGCT GGCCCGCGAC TCAACCGCGC
CTGTCCGAAT CTGACTTCAG GATCGTGACT CTGCCGGCCG GCAATGACCA CATGTCACAT
CGGCAGAGTG ATCATCGAGT GCCCGATGCT CCTGACGTGA CATACAGCCG GCCGTCTCCG
GAGCTATCCA GCCCTGATCA AGAAGCTGTA GCGCCGCCCG TCGGCTCGAT ACGGGGTCGC
CGGGTGGTTG ACGATGGAAG TCGGGGAAGT AGCTTGCCGA CCGCATCAAT GAAGCGTAGC
GGCGGGGTCT CAGTCATGGC TCCTGGAACG ACGGCTGGCA ACTCTGGTTC ACGAGTCGAC
AACGTCAAAC CAGCAAACGC TGGTCAGGAG CAGGCTACGC CGGCGCCTAT TGCGCCTGAA
ACAGTTGGCC GGAGAAGTTC GACGTCCGGT GGCATCGGCC TCGCAAGCGT CGGGTCAGAA
GTCGGTGGCG TCGACAGAAA GGTGCAGATC GATCGCACGC CAGGCGGGTC ATCTGCTGCA
GGGGATGCCT TGCCACCGAC ACCCTCGCTT TACCTCGATG CCGCAACCGT CGGCGCCGAC
GCATCTGCTC CGCACGACGA CTCGGCGGTA AGCGGCGCGG CCACTTCCCC GAGCGTTCTG
GTTTCGGCGA GTCGACTAGG ACGCGGTTCT GCAGATGACG CACGTGGAGT CAAGTCGCTC
CCGAGCGCGG GCGTTGCAAG CGATGATCCC GACAACCAAT GA
|
|---|
| Protein sequence | MNMEIDTYGN VDTLYFVMQG IASFMGSGTW TGLIRYTLLC GVVIWTIVAI GRKGYEIFRW
FAAAMLMTQL LLLPIENVFI TDVNNVQPTR EVDHVPAYLA AVAQSFTLIS HVLTQSYETI
FSVPDTLTLK KGDVGFGISV LQKVNKAEIT DPGLHADLIQ FFKECTVYDI QDGAIDPKTI
MNGTDPFNTV FTSTSPARYV TTNTLTANPT TDTCSATGTL LLLRVQDAEQ AAEQMYGSEM
YPEIADPSMA KAEFVNAIGD SYGFILQSSQ NASSALRQAM FNNVWRQAGA ELPAMLNDPA
RVAEVNALMS SAQAAVATNG SLASMAILAK NTLPTVRNYA EAIIYAVFPL ILVLCLISGA
DGAKRILAMY AKTVAWVSIW PMLFAVINGL SLIHLSHEMR SMSLQAGVPF GMAAKFGQTL
LDEQALLGYM VIITPPLAWM LLNFASAGVV GAFSQLSGAL TGSAQQIGGQ QAQGDENIGN
VHMDSSSIDN ASRNVTSANK YDNTVQSRTG SMNVDTGTGS AFTNFANGLI ARTEFQNSLG
VSATSQDAFE RSLGTDTSTG VAANRTNSTF AGREQLASST NSVSSSQERG SSQRLSDDSS
SGTRASSSQT GERRTAHDQQ YAIDQSHSVD GTTSAGAKGS IMLGGGFAKS FGEDGAPSGN
AGGGGGGSAG GSGRGPSGNG RQGSSNPVSN SPLFNQAEED KLARKAESLG KSPNEVQAIR
DAYRSKVRAA DYANGGGTGK GQSSLKFGLD VSGEGGYTKS WRNSDAQKFV DQNSSLAAYT
ESDNVSHEGS QMHNDSTGME SGQHVRSDRS ASLTDQVSSG SRVAADLTRS ADVRQRGSTQ
VVSRVDTSTN LMTPENLQAV AARNGMRYSQ LMTLPSPQIA QLVAQDAAMR DIVSRNSTLP
TTARDGSTLP ASGIDVVRQD QRNQSGVGAS APASFRRFAG AVGPVDTTPL DVATPMPQIV
TAAQHRVDVT QQRVASESAA PIKQVRDHVD PSADNKPLMT PERAPGRSLS SPPVAPSASD
SKGPLSAWVN SIQPSGPAGT TSTSAPIENF LRPRTTGNGP TLEAARAAET GTGWPATQPR
LSESDFRIVT LPAGNDHMSH RQSDHRVPDA PDVTYSRPSP ELSSPDQEAV APPVGSIRGR
RVVDDGSRGS SLPTASMKRS GGVSVMAPGT TAGNSGSRVD NVKPANAGQE QATPAPIAPE
TVGRRSSTSG GIGLASVGSE VGGVDRKVQI DRTPGGSSAA GDALPPTPSL YLDAATVGAD
ASAPHDDSAV SGAATSPSVL VSASRLGRGS ADDARGVKSL PSAGVASDDP DNQ
|
|---|
| |