4 homologs were found in PanDaTox collection
for query gene AFE_1068 on replicon NC_011761
Organism: Acidithiobacillus ferrooxidans ATCC 23270



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011761  AFE_1068  pilus assembly protein TraG, putative  100 
 
 
1218 aa  2451    Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
NC_008826  Mpe_B0376  hypothetical protein  26.18 
 
 
1172 aa  119  3.9999999999999997e-25  Methylibium petroleiphilum PM1  Bacteria  normal  0.276415  normal 
 
 
-
 
NC_009140  SNSL254_pSN254_0189  type IV conjugative transfer system protein TraG  23 
 
 
1204 aa  90.9  1e-16  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  hitchhiker  0.0000111366 
 
 
-
 
NC_011083  SeHA_C1594  sex pilus assembly  22.5 
 
 
1145 aa  78.6  0.0000000000008  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
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