9 homologs were found in PanDaTox collection
for query gene Mpal_R0063 on replicon NC_011832
Organism: Methanosphaerula palustris E1-9c



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011832  Mpal_R0063  tRNA-Glu  100 
 
 
75 bp  149  1.0000000000000001e-34  Methanosphaerula palustris E1-9c  Archaea  normal  0.0632745  normal 
 
 
-
 
NC_009051  Memar_R0035  tRNA-Glu  92 
 
 
75 bp  101  2e-20  Methanoculleus marisnigri JR1  Archaea  normal  n/a   
 
 
-
 
NC_008553  Mthe_R0012  tRNA-Glu  91.38 
 
 
78 bp  75.8  0.000000000001  Methanosaeta thermophila PT  Archaea  normal  n/a   
 
 
-
 
NC_007955  Mbur_R0052  tRNA-Glu  88.14 
 
 
78 bp  61.9  0.00000002  Methanococcoides burtonii DSM 6242  Archaea  normal  n/a   
 
 
-
 
NC_009712  Mboo_R0027  tRNA-Glu  100 
 
 
75 bp  58  0.0000003  Candidatus Methanoregula boonei 6A8  Archaea  normal  normal  0.024041 
 
 
-
 
NC_009712  Mboo_R0033  tRNA-Glu  100 
 
 
75 bp  58  0.0000003  Candidatus Methanoregula boonei 6A8  Archaea  normal  normal  0.84722 
 
 
-
 
NC_007355  Mbar_AR0011  tRNA-Glu  86.44 
 
 
75 bp  54  0.000005  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal  0.638605 
 
 
-
 
NC_007796  Mhun_R0016  tRNA-Glu  88.64 
 
 
73 bp  48.1  0.0003  Methanospirillum hungatei JF-1  Archaea  normal  0.0206825  normal  0.182521 
 
 
-
 
NC_013595  Sros_2107  Proline--tRNA ligase  93.33 
 
 
1743 bp  44.1  0.004  Streptosporangium roseum DSM 43021  Bacteria  normal  0.205273  normal  0.90716 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>