15 homologs were found in PanDaTox collection
for query gene Ksed_25960 on replicon NC_013169
Organism: Kytococcus sedentarius DSM 20547



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013169  Ksed_25960  Bacterial signal recognition particle RNA  100 
 
 		 105 bp  208  2e-52  Kytococcus sedentarius DSM 20547  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013530  Xcel_R0010  SRP RNA; RNA component of signal recognitionparti cle  94.59 
 
 		 93 bp  58  0.0000004  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  1  n/a   
 
 
-
 
NC_013132  Cpin_R0046  SRP RNA; RNA component of signal recognition particle  94.29 
 
 		 100 bp  54  0.000007  Chitinophaga pinensis DSM 2588  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013521  Sked_04670    90.7 
 
 		 100 bp  54  0.000007  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.310268  normal  0.967006 
 
 
-
 
NC_009921  Franean1_R0055  SRP RNA; RNA component of signal recognition particle  93.94 
 
 		 99 bp  50.1  0.0001  Frankia sp. EAN1pec  Bacteria  normal  0.603304  normal  1 
 
 
-
 
NC_008705  Mkms_R0053  SRP RNA; RNA component of signal recognition particle  93.75 
 
 		 94 bp  48.1  0.0004  Mycobacterium sp. KMS  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008726  Mvan_R0058  SRP RNA; RNA component of signal recognition particle  93.75 
 
 		 93 bp  48.1  0.0004  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.0164888  normal  1 
 
 
-
 
NC_009077  Mjls_R0051  SRP RNA; RNA component of signal recognition particle  93.75 
 
 		 93 bp  48.1  0.0004  Mycobacterium sp. JLS  Bacteria  normal  0.415125  normal  1 
 
 
-
 
NC_009338  Mflv_R0010  SRP RNA; RNA component of signal recognition particle  93.75 
 
 		 93 bp  48.1  0.0004  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.751419  normal  0.854673 
 
 
-
 
NC_013441  Gbro_R0009  SRP RNA; RNA component of signal recognitionparti cle  93.75 
 
 		 92 bp  48.1  0.0004  Gordonia bronchialis DSM 43247  Bacteria  normal  1  n/a   
 
 
-
 
NC_013721  HMPREF0424_1408  Bacterial signal recognition particle RNA  96.43 
 
 		 98 bp  48.1  0.0004  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  1 
 
 
-
 
NC_014158  Tpau_R0052  SRP RNA; RNA component of signal recognitionparti cle  93.75 
 
 		 92 bp  48.1  0.0004  Tsukamurella paurometabola DSM 20162  Bacteria  normal  1  n/a   
 
 
-
 
NC_009664  Krad_R0006  SRP RNA; RNA component of signal recognition particle  91.43 
 
 		 93 bp  46.1  0.002  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.558781  normal  0.197707 
 
 
-
 
NC_012803  Mlut_02680  Bacterial signal recognition particle RNA  85.45 
 
 		 100 bp  46.1  0.002  Micrococcus luteus NCTC 2665  Bacteria  normal  0.218549  n/a   
 
 
-
 
NC_013174  Jden_R0011  SRP RNA; RNA component of signal recognitionparti cle  89.74 
 
 		 90 bp  46.1  0.002  Jonesia denitrificans DSM 20603  Bacteria  normal  0.207458  normal  1 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>