9 homologs were found in PanDaTox collection
for query gene Cpin_R0046 on replicon NC_013132
Organism: Chitinophaga pinensis DSM 2588



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013132  Cpin_R0046  SRP RNA; RNA component of signal recognition particle  100 
 
 		 100 bp  198  2.0000000000000003e-49  Chitinophaga pinensis DSM 2588  Bacteria  normal  1  normal  1 
 
 
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NC_012803  Mlut_02680  Bacterial signal recognition particle RNA  95 
 
 		 100 bp  63.9  0.000000007  Micrococcus luteus NCTC 2665  Bacteria  normal  0.218549  n/a   
 
 
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NC_009441  Fjoh_R0074  SRP RNA; RNA component of signal recognition particle  85.71 
 
 		 100 bp  56  0.000002  Flavobacterium johnsoniae UW101  Bacteria  normal  0.127396  n/a   
 
 
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NC_011886  Achl_R0008  SRP RNA; RNA component of signal recognitionparti cle  94.29 
 
 		 90 bp  54  0.000007  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  1 
 
 
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NC_013169  Ksed_25960  Bacterial signal recognition particle RNA  94.29 
 
 		 105 bp  54  0.000007  Kytococcus sedentarius DSM 20547  Bacteria  normal  1  normal  1 
 
 
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NC_008541  Arth_R0009  SRP RNA; RNA component of signal recognition particle  94.12 
 
 		 90 bp  52  0.00003  Arthrobacter sp. FB24  Bacteria  normal  0.408467  n/a   
 
 
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NC_013162  Coch_R0020  SRP RNA; RNA component of signal recognitionparti cle  93.55 
 
 		 101 bp  46.1  0.002  Capnocytophaga ochracea DSM 7271  Bacteria  normal  0.192945  n/a   
 
 
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NC_013501  Rmar_R0038  SRP RNA; RNA component of signal recognitionparti cle  82.86 
 
 		 108 bp  44.1  0.006  Rhodothermus marinus DSM 4252  Bacteria  normal  0.263697  n/a   
 
 
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NC_013730  Slin_R0025  SRP RNA; RNA component of signal recognitionparti cle  96.15 
 
 		 92 bp  44.1  0.006  Spirosoma linguale DSM 74  Bacteria  normal  1  normal  1 
 
 
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