6 homologs were found in PanDaTox collection
for query gene HMPREF0424_1408 on replicon NC_013721
Organism: Gardnerella vaginalis 409-05



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013721  HMPREF0424_1408  Bacterial signal recognition particle RNA  100 
 
 		 98 bp  194  3e-48  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  1 
 
 
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NC_013093  Amir_R0010  SRP RNA; RNA component of signal recognitionparti cle  89.8 
 
 		 100 bp  58  0.0000004  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
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NC_007777  Francci3_R0006  SRP RNA; RNA component of signal recognition particle  86.54 
 
 		 92 bp  48.1  0.0004  Frankia sp. CcI3  Bacteria  normal  0.747626  normal  1 
 
 
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NC_013169  Ksed_25960  Bacterial signal recognition particle RNA  96.43 
 
 		 105 bp  48.1  0.0004  Kytococcus sedentarius DSM 20547  Bacteria  normal  1  normal  1 
 
 
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NC_008726  Mvan_R0058  SRP RNA; RNA component of signal recognition particle  86.27 
 
 		 93 bp  46.1  0.002  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.0164888  normal  1 
 
 
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NC_009921  Franean1_R0055  SRP RNA; RNA component of signal recognition particle  86.27 
 
 		 99 bp  46.1  0.002  Frankia sp. EAN1pec  Bacteria  normal  0.603304  normal  1 
 
 
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